{"id":18621331,"url":"https://github.com/4ment/aiv-rate-heterogeneity","last_synced_at":"2026-01-24T13:17:23.972Z","repository":{"id":33857761,"uuid":"37563944","full_name":"4ment/aiv-rate-heterogeneity","owner":"4ment","description":"Avian influenza virus data sets","archived":false,"fork":false,"pushed_at":"2016-02-22T02:25:35.000Z","size":835,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":3,"default_branch":"master","last_synced_at":"2024-12-27T04:42:26.208Z","etag":null,"topics":["data","influenza"],"latest_commit_sha":null,"homepage":"","language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/4ment.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2015-06-17T00:46:19.000Z","updated_at":"2017-05-04T23:37:13.000Z","dependencies_parsed_at":"2022-08-07T23:17:02.149Z","dependency_job_id":null,"html_url":"https://github.com/4ment/aiv-rate-heterogeneity","commit_stats":null,"previous_names":[],"tags_count":2,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/4ment%2Faiv-rate-heterogeneity","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/4ment%2Faiv-rate-heterogeneity/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/4ment%2Faiv-rate-heterogeneity/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/4ment%2Faiv-rate-heterogeneity/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/4ment","download_url":"https://codeload.github.com/4ment/aiv-rate-heterogeneity/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":239414687,"owners_count":19634493,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["data","influenza"],"created_at":"2024-11-07T04:10:42.252Z","updated_at":"2025-11-03T13:30:29.380Z","avatar_url":"https://github.com/4ment.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# Avian influenza virus exhibits distinct evolutionary dynamics in wild birds and poultry\n\nThis repository contains the data sets supporting the results of the following article:\n\nFourment M. \u0026 Holmes E.C. Avian influenza virus exhibits distinct evolutionary dynamics in wild birds and poultry. *BMC Evolutionary Biology*, 2015, 15:120; doi: 10.1186/s12862-015-0410-5.\n\nEach FASTA file contains a nucleotide alignment:\n\n* H4-PA.fa, H4-PB1.fa, and H4-PB2.fa contain H4 internal genes isolated from wild birds only.\n* H6-PA.fa, H6-PB1.fa, and H6-PB2.fa contain H6 internal genes isolated from wild birds only.\n* H5-poultry-PA.fa, H5-poultry-PB1.fa, and H5-poultry-PB2.fa contain H5 internal genes isolated from poultry (i.e. turkey and chicken) only.\n* H6-poultry-PA.fa, H6-poultry-PB1.fa, and H6-poultry-PB2.fa contain H6 internal genes isolated from poultry (i.e. turkey and chicken) only.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2F4ment%2Faiv-rate-heterogeneity","html_url":"https://awesome.ecosyste.ms/projects/github.com%2F4ment%2Faiv-rate-heterogeneity","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2F4ment%2Faiv-rate-heterogeneity/lists"}