{"id":22257068,"url":"https://github.com/Senckenberg-DCBiodivIT/FAIR-workflow-platform-argo-connector","last_synced_at":"2025-07-28T07:31:33.780Z","repository":{"id":264845492,"uuid":"887406085","full_name":"dnlbauer/FAIR-workflow-platform-argo-connector","owner":"dnlbauer","description":"Argo connector for FAIR workflow platform","archived":false,"fork":false,"pushed_at":"2024-11-26T11:49:14.000Z","size":40,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2024-11-26T12:33:15.316Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/dnlbauer.png","metadata":{"files":{"readme":"README.MD","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-11-12T17:29:44.000Z","updated_at":"2024-11-26T11:49:18.000Z","dependencies_parsed_at":"2024-11-26T12:43:48.618Z","dependency_job_id":null,"html_url":"https://github.com/dnlbauer/FAIR-workflow-platform-argo-connector","commit_stats":null,"previous_names":["dnlbauer/fair-workflow-platform-argo-connector"],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dnlbauer%2FFAIR-workflow-platform-argo-connector","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dnlbauer%2FFAIR-workflow-platform-argo-connector/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dnlbauer%2FFAIR-workflow-platform-argo-connector/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dnlbauer%2FFAIR-workflow-platform-argo-connector/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/dnlbauer","download_url":"https://codeload.github.com/dnlbauer/FAIR-workflow-platform-argo-connector/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":227877882,"owners_count":17833559,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-12-03T08:09:31.141Z","updated_at":"2025-07-28T07:31:28.352Z","avatar_url":"https://github.com/dnlbauer.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Argo-connector\n\nA connector that can start argo workflows from a submitted workflow file and \npush resulting artifacts from argo to cordra to store them as digital objects.\n\nThis is part of the [FAIR workflow platform](https://github.com/dnlbauer/FAIR-workflow-platform).\n\n## Build\n\n```bash\ndocker build . argo-connector .\n```\n\n## Run with docker\n\n```bash\ndocker run -d -p 8000:8000 --env-file .env argo-connector\n```\n\nMake sure to set the neccessary environment variables:\n\n| Variable name | Description | Default |\n|--|--|--|\n| ARGO_BASE_URL\t| Base URL of the Argo workflow engine | |\n| ARGO_TOKEN | Authentication token for Argo | |\n| CORDRA_BASE_URL | Base URL of the Cordra instance | |\n| CORDRA_USER | Username for Cordra authentication | |\n| CORDRA_PASSWORD | Password for Cordra authentication | |\n| ARGO_DEFAULT_NAMESPACE | Default namespace for Argo workflows | \"argo\" |\n| CORDRA_MAX_FILE_SIZE | Maximum file size for Cordra uploads (in bytes). Some Cordra backends like S3 have a fixed file size limit. This allows to skip files exeeding that limit during processing of workflow results. | 104857600\n| AUTH_USERNAME | Basic auth username for this service, if required | None\n| AUTH_PASSWORD | Basic auth password for this service, if required | None\n| ROOT_PATH | Root path, useful if the app is behind a proxy. | None\n\n## API Access\n\nAPI documentation can be accessed at [https://localhost:8000/docs] (see [https://fastapi.tiangolo.com/reference/openapi/docs/](fastapi))\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2FSenckenberg-DCBiodivIT%2FFAIR-workflow-platform-argo-connector","html_url":"https://awesome.ecosyste.ms/projects/github.com%2FSenckenberg-DCBiodivIT%2FFAIR-workflow-platform-argo-connector","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2FSenckenberg-DCBiodivIT%2FFAIR-workflow-platform-argo-connector/lists"}