{"id":22257069,"url":"https://github.com/Senckenberg-DCBiodivIT/fair-workflow-platform","last_synced_at":"2025-07-28T07:31:35.342Z","repository":{"id":264837474,"uuid":"887337749","full_name":"dnlbauer/fair-workflow-platform","owner":"dnlbauer","description":"A workflow platform using machine-actionable RO-Crates and FAIR 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A FAIR workflow platform for biodiversity digital twins\n\nThis FAIR workflow platform is developed as a solution\nfor executing and sharing [FAIR](https://www.go-fair.org/fair-principles/) (Findable, Accessible, Interoperable, Reuseable)\nworkflows across research domains.\nIt allows to execute and reuse machine-actionable workflows and resulting data,\nencapsulated in [Research Object Crates (RO-Crates)](https://www.researchobject.org/ro-crate/)\nand advertised via [FAIR Signposting](https://signposting.org/FAIR/).\n\nMore infos on the use case: [https://doi.org/10.3897/biss.8.134479](https://doi.org/10.3897/biss.8.134479)\n\n\n## Features\n\n- **Login via ORCID**\n- **Workflow Execution** Integrates with [Argo Workflows](https://argoproj.github.io/workflows/) for workflow execution.\n- **RO-Crate compatibility**: End-To-End integration of RO-Crates\n- **Digital Object Management**: Workflows and datasets are stored as Digital Objects using [Cordra](https://www.cordra.org/)\n- **FAIR Signposting** on the frontend allows for integration of results into the semantic web.\n\n## Architecture Overview\n\n\nThe workflow platform employs a microservice architecture allowing components to be extended or replaced for flexibility.\n\n- **Frontend**: User-facing interface for submitting workflows and viewing datasets.\n- **Digital Object Repository**: [Cordra](https://www.cordra.org/)-based system for storing and managing datasets as FAIR Digital Objects\n- **Submission Service**: Handles orchestration between frontend, digital object repository and the workflow service.\n- **Workflow Service**: A workflow execution engine for executing workflows.\n\n![Components Diagram](assets/components.png)\n\nDetailed architecture information including data flows and interaction diagrams is available in the [Architecture Documentation](./architecture.md)\n\n## Modules\n\n- [**Frontend**](https://github.com/Senckenberg-DCBiodivIT/FAIR-workflow-platform-frontend): Django-based frontend\n- [**Cordra schema**](https://github.com/Senckenberg-DCBiodivIT/FAIR-workflow-platform-cordra-schema): Schemas and metadata models for the digital object Repository\n- [**Argo Workflow Connector**](https://github.com/Senckenberg-DCBiodivIT/FAIR-workflow-platform-argo-connector): An implementation of the `Submission service` that orchestrates workflows in Argo\n- [**Crop wild relatives Workflow RO-Crate**](https://github.com/Senckenberg-DCBiodivIT/cwr-workflow-ro-crate): Sapmle RO-Crate with a workflow that runs the [Crop Wild Relatives prototype Digital Twin](https://github.com/BioDT/uc-CWR). See [here](https://doi.org/10.3897/rio.10.e125192) for details. \n\n## Deployment at DestinE\n\nA version of the platform is currently deployed to the [Destination Earth Platform](https://destination-earth.eu/) and can be accessed here: [Crop Wild Relatives](http://workflow.earth/). \n\n### Deployment diagram\n\n![Deployment Diagram](assets/deployment.png)\n\n## License\n\nLicensed under the [MIT](./LICENSE) license.\n\n## References\n\nIf you want to cite this project, here are some references you can use:\n\n- Dataspace Integration for Agrobiodiversity Digital Twins with RO-Crate [https://doi.org/10.3897/biss.8.134479](https://doi.org/10.3897/biss.8.134479)\n- FAIR dataspace integration for Agrobiodiversity Digital Twins (Poster) [https://doi.org/10.5281/zenodo.13928654](https://doi.org/10.5281/zenodo.13928654)\n\n## Funding\n\n- EUMETSAT: Agriculture and Climate Change DEDL Use Case\n- The European Commission: [BioDT – Biodiversity Digital Twin for Advanced Modelling, Simulation and Prediction Capabilities](https://biodt.eu/)\n- The DFG as Part of [FAIRagro](https://fairagro.net/)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2FSenckenberg-DCBiodivIT%2Ffair-workflow-platform","html_url":"https://awesome.ecosyste.ms/projects/github.com%2FSenckenberg-DCBiodivIT%2Ffair-workflow-platform","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2FSenckenberg-DCBiodivIT%2Ffair-workflow-platform/lists"}