{"id":21629566,"url":"https://github.com/abrie/tumor-gradient","last_synced_at":"2025-03-18T21:22:17.423Z","repository":{"id":40981189,"uuid":"200046382","full_name":"abrie/tumor-gradient","owner":"abrie","description":"Measuring a tumor's density gradient during treatment.","archived":false,"fork":false,"pushed_at":"2022-06-21T22:26:08.000Z","size":492,"stargazers_count":0,"open_issues_count":1,"forks_count":0,"subscribers_count":2,"default_branch":"master","last_synced_at":"2025-01-24T23:27:13.330Z","etag":null,"topics":["biomedical","tumor-evolution"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/abrie.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2019-08-01T12:27:29.000Z","updated_at":"2019-08-28T03:52:11.000Z","dependencies_parsed_at":"2022-09-23T22:51:20.785Z","dependency_job_id":null,"html_url":"https://github.com/abrie/tumor-gradient","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/abrie%2Ftumor-gradient","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/abrie%2Ftumor-gradient/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/abrie%2Ftumor-gradient/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/abrie%2Ftumor-gradient/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/abrie","download_url":"https://codeload.github.com/abrie/tumor-gradient/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":244306487,"owners_count":20431825,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["biomedical","tumor-evolution"],"created_at":"2024-11-25T02:08:03.397Z","updated_at":"2025-03-18T21:22:17.403Z","avatar_url":"https://github.com/abrie.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Measuring Changes in Tumour Density\n\nGiven a series of [NIfTI](https://nifti.nimh.nih.gov/) images describing a tumour under treatment, measure changes in the tumour's [Hounsfield](https://en.wikipedia.org/wiki/Hounsfield_scale) radiodensity as a function of time.\n\nA screenshot of the result:\n\n![Alt text](screenshots/1.jpg?raw=true \"Output screenshot\")\n\n## How to run it:\n\nFirst, install dependencies:\n\n```make install```\n\nThird, run the tests:\n\n```make test```\n\nDo all tests pass without error?\n\nIf yes, you can run the app (assuming you have patient data available):\n\n```make run```\n\n## Note\nNo patient data has been committed to this repository.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fabrie%2Ftumor-gradient","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fabrie%2Ftumor-gradient","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fabrie%2Ftumor-gradient/lists"}