{"id":26448820,"url":"https://github.com/adeschen/consensusseeker","last_synced_at":"2025-03-18T14:42:31.540Z","repository":{"id":223781809,"uuid":"761529641","full_name":"adeschen/consensusSeekeR","owner":"adeschen","description":"This  R package compares genomic positions and genomic ranges from multiple experiments to extract common regions. The size of the analyzed region is adjustable as well as the number of experiences in which a feature must be present in a potential region to tag this region as a consensus region. 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If needed, the consensus regions can be extended to cover the entire regions of enclosed peaks.\n\n\n## Bioconductor Package ##\n\n[![Bioconductor Time](http://bioconductor.org/shields/years-in-bioc/consensusSeekeR.svg)](http://bioconductor.org/packages/release/bioc/html/consensusSeekeR.html \"Bioconductor status\")\n\nconsensusSeekeR is now an official package of [Bioconductor](http://bioconductor.org/). \nThe current release can be directly downloaded from their website:\n[Current release](http://bioconductor.org/packages/consensusSeekeR/)\n\n\n## Citing ##\n\nIf you use this package for a publication, we would ask you to cite the following:\n\n\u003eSamb R, Khadraoui K, Belleau P, et al. (2015) Using informative Multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling. Statistical Applications in Genetics and Molecular Biology. Published online before print December 10, 2015. \u003ca href=\"http://dx.doi.org/10.1515/sagmb-2014-0098\"\u003edoi:10.1515/sagmb-2014-0098\u003c/a\u003e\n\n\n## Authors ##\n\n[Astrid Desch\u0026ecirc;nes](http://ca.linkedin.com/in/astriddeschenes \n\"Astrid Desch\u0026ecirc;nes\"), \n[Fabien Claude Lamaze](http://ca.linkedin.com/in/fabienlamaze/en \n\"Fabien Claude Lamaze\"), \n[Pascal Belleau](http://ca.linkedin.com/in/pascalbelleau \n\"Pascal Belleau\") \nand [Arnaud Droit](http://ca.linkedin.com/in/drarnaud \n\"Arnaud Droit\")\n\n## Maintainer ##\n\n[Astrid Desch\u0026ecirc;nes](http://ca.linkedin.com/in/astriddeschenes \n\"Astrid Desch\u0026ecirc;nes\")\n\n## License ##\n\nThis package and the underlying **consensusSeekeR** code are distributed under the \nArtistic license 2.0. You are free to use and redistribute this software. \n\nFor more information on Artistic 2.0 License see\n[http://opensource.org/licenses/Artistic-2.0](http://opensource.org/licenses/Artistic-2.0)\n\n## Bugs/Feature requests ##\n\nIf you have any bugs or feature requests,\n[let us know](https://github.com/adeschen/consensusSeekeR/issues). Thanks!\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fadeschen%2Fconsensusseeker","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fadeschen%2Fconsensusseeker","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fadeschen%2Fconsensusseeker/lists"}