{"id":26448826,"url":"https://github.com/adeschen/similarpeak","last_synced_at":"2025-03-18T14:42:32.022Z","repository":{"id":19522910,"uuid":"22770112","full_name":"adeschen/similaRpeak","owner":"adeschen","description":"Bioconductor Package - Metrics to estimate the level of similarity between two ChIP-Seq profiles","archived":false,"fork":false,"pushed_at":"2022-03-16T00:54:27.000Z","size":548,"stargazers_count":7,"open_issues_count":0,"forks_count":1,"subscribers_count":4,"default_branch":"master","last_synced_at":"2023-11-20T16:00:20.408Z","etag":null,"topics":["bioconductor","bioconductor-package","chip-profiles","chip-seq","metrics","r"],"latest_commit_sha":null,"homepage":"http://bioconductor.org/packages/similaRpeak/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/adeschen.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2014-08-08T20:09:28.000Z","updated_at":"2023-01-28T08:47:10.000Z","dependencies_parsed_at":"2022-08-05T04:17:27.065Z","dependency_job_id":null,"html_url":"https://github.com/adeschen/similaRpeak","commit_stats":null,"previous_names":[],"tags_count":7,"template":null,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/adeschen%2FsimilaRpeak","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/adeschen%2FsimilaRpeak/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/adeschen%2FsimilaRpeak/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/adeschen%2FsimilaRpeak/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/adeschen","download_url":"https://codeload.github.com/adeschen/similaRpeak/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":244243668,"owners_count":20422112,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioconductor","bioconductor-package","chip-profiles","chip-seq","metrics","r"],"created_at":"2025-03-18T14:42:31.353Z","updated_at":"2025-03-18T14:42:32.014Z","avatar_url":"https://github.com/adeschen.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"similaRpeak : metrics to estimate the level of similarity between two ChIP profiles.\r\n=====================\r\n\r\n[![R-CMD-check-bioc](https://github.com/adeschen/similaRpeak/actions/workflows/check-bioc.yaml/badge.svg)](https://github.com/adeschen/similaRpeak/actions/workflows/check-bioc.yaml)\r\n[![codecov](https://codecov.io/gh/adeschen/similaRpeak/branch/master/graph/badge.svg)](https://codecov.io/gh/adeschen/similaRpeak)\r\n[![License: Artistic-2.0](https://img.shields.io/badge/License-Artistic%202.0-0298c3.svg)](https://opensource.org/licenses/Artistic-2.0)\r\n\r\n\r\nThis package calculates metrics to estimate a level of similarity between two \r\nChIP-Seq profiles.\r\n\r\n## Bioconductor Package ##\r\n\r\n[![Bioconductor Time](http://bioconductor.org/shields/years-in-bioc/similaRpeak.svg)](http://bioconductor.org/packages/release/bioc/html/similaRpeak.html \"Bioconductor status\")\r\n\r\nsimilaRpeak is now an official package of [Bioconductor](http://bioconductor.org/). The current release can be directly downloaded from their website:\r\n[Current release](http://bioconductor.org/packages/release/bioc/html/similaRpeak.html)\r\n\r\nHowever, all official releases can be downloaded from this site:\r\n[All releases](https://github.com/adeschen/similaRpeak/releases)\r\n\r\n\r\n## Note ##\r\n\r\nTo use this current similaRpeak version, the use of the R6 package (\u003e= 2.0) is mandatory.\r\n\r\n\r\n## Authors ##\r\n\r\n[Astrid Desch\u0026ecirc;nes](http://ca.linkedin.com/in/astriddeschenes \"Astrid Desch\u0026ecirc;nes\"), \r\nElsa Bernatchez, \r\n[Charles Joly Beauparlant](http://ca.linkedin.com/pub/charles-joly-beauparlant/89/491/3b3 \"Charles Joly Beauparlant\"), \r\n[Fabien Claude Lamaze](http://ca.linkedin.com/in/fabienlamaze/en \"Fabien Claude Lamaze\"), \r\n[Rawane Samb](http://ca.linkedin.com/in/rawanesamb \"Rawane Samb\"), \r\n[Pascal Belleau](http://ca.linkedin.com/in/pascalbelleau \"Pascal Belleau\") \r\nand [Arnaud Droit](http://ca.linkedin.com/in/drarnaud \"Arnaud Droit\").\r\n\r\n## Maintainer ##\r\n\r\n[Astrid Desch\u0026ecirc;nes](http://ca.linkedin.com/in/astriddeschenes \"Astrid Desch\u0026ecirc;nes\")\r\n\r\n## License ##\r\n\r\nThis package and the underlying similaRpeak code are distributed under the \r\nArtistic license 2.0. You are free to use and redistribute this software. \r\n\r\nFor more information on Artistic 2.0 License see\r\n[http://opensource.org/licenses/Artistic-2.0](http://opensource.org/licenses/Artistic-2.0)\r\n\r\n## Bugs/Feature requests ##\r\n\r\nIf you have any bugs or feature requests, \r\n[let us know](https://github.com/adeschen/similaRpeak/issues). \r\n\r\nThanks!\r\n\r\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fadeschen%2Fsimilarpeak","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fadeschen%2Fsimilarpeak","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fadeschen%2Fsimilarpeak/lists"}