{"id":20288162,"url":"https://github.com/aebruno/nwalgo","last_synced_at":"2025-04-11T10:01:53.957Z","repository":{"id":28245217,"uuid":"31750924","full_name":"aebruno/nwalgo","owner":"aebruno","description":"Needleman-Wunsch Alignment in Go","archived":false,"fork":false,"pushed_at":"2020-11-09T19:43:02.000Z","size":615,"stargazers_count":12,"open_issues_count":1,"forks_count":6,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-03-25T06:51:14.425Z","etag":null,"topics":["bioinformatics","global-alignment","go"],"latest_commit_sha":null,"homepage":null,"language":"Go","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/aebruno.png","metadata":{"files":{"readme":"README.rst","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2015-03-06T03:34:04.000Z","updated_at":"2023-12-26T19:46:53.000Z","dependencies_parsed_at":"2022-08-21T17:10:25.026Z","dependency_job_id":null,"html_url":"https://github.com/aebruno/nwalgo","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aebruno%2Fnwalgo","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aebruno%2Fnwalgo/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aebruno%2Fnwalgo/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aebruno%2Fnwalgo/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aebruno","download_url":"https://codeload.github.com/aebruno/nwalgo/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":248372206,"owners_count":21093133,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","global-alignment","go"],"created_at":"2024-11-14T14:44:31.999Z","updated_at":"2025-04-11T10:01:53.877Z","avatar_url":"https://github.com/aebruno.png","language":"Go","funding_links":[],"categories":[],"sub_categories":[],"readme":"===============================================================================\nnwalgo - Needleman-Wunsch Alignment in Go\n===============================================================================\n\n-------------------------------------------------------------------------------\nAbout\n-------------------------------------------------------------------------------\n\nAn implementation of the Needleman-Wunsch global alignment algorithm [1] in Go.\nComputes the alignment score and optimal global alignment.\n\n-------------------------------------------------------------------------------\nInstall\n-------------------------------------------------------------------------------\n\nFetch from github::\n\n    $ go get github.com/aebruno/nwalgo/...\n\n-------------------------------------------------------------------------------\nUsage\n-------------------------------------------------------------------------------\n\nAlign 2 DNA sequences::\n\n    $ nwalgo -seq1 GAAAAAAT -seq2 GAAT \n    GAAAAAAT\n    GAA----T\n    Score: 0\n\nFrom code::\n\n    package main\n\n    import (\n        \"github.com/aebruno/nwalgo\"\n    )\n\n    func main() {\n        aln1, aln2, score := nwalgo.Align(\"GAAAAAAT\", \"GAAT\", 1, -1, -1)\n    }\n\n-------------------------------------------------------------------------------\nReferences\n-------------------------------------------------------------------------------\n\n[1] http://en.wikipedia.org/wiki/Needleman-Wunsch_algorithm\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Faebruno%2Fnwalgo","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Faebruno%2Fnwalgo","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Faebruno%2Fnwalgo/lists"}