{"id":20109550,"url":"https://github.com/agentcooper/cell-js","last_synced_at":"2025-03-02T18:23:34.126Z","repository":{"id":141124640,"uuid":"91917033","full_name":"agentcooper/cell-js","owner":"agentcooper","description":null,"archived":false,"fork":false,"pushed_at":"2017-05-20T21:27:59.000Z","size":4,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":3,"default_branch":"master","last_synced_at":"2025-01-13T05:30:00.187Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"JavaScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/agentcooper.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2017-05-20T21:22:45.000Z","updated_at":"2018-07-05T10:25:36.000Z","dependencies_parsed_at":null,"dependency_job_id":"6020ed60-0f64-4c29-8c5a-bc3d74111127","html_url":"https://github.com/agentcooper/cell-js","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/agentcooper%2Fcell-js","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/agentcooper%2Fcell-js/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/agentcooper%2Fcell-js/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/agentcooper%2Fcell-js/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/agentcooper","download_url":"https://codeload.github.com/agentcooper/cell-js/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":241549746,"owners_count":19980580,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-13T18:08:49.440Z","updated_at":"2025-03-02T18:23:34.118Z","avatar_url":"https://github.com/agentcooper.png","language":"JavaScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"### ⚠️ Draft\n\nCan ideas be transferred more efficiently than using a natural language?\n\nShould we talk about complex systems (math, physics, chemistry, biology) and their processes (highly structured information) using natural languages (low structure)?\n\nCreating a constraint (going from a natural language to a special language) might increase clarity. This already happened in mathematics with symbolics and equations.\n\nHaving a structured description of a process will allow less painful transfer to interactive models. In case of the natural language a completely separate program has to be developed. Interactivity helps to learn: http://distill.pub/about/, http://worrydream.com/LearnableProgramming/, https://scratch.mit.edu/.\n\nProgramming languages are good at: abstractions, collections, dependencies and connections.\n\n[Alan Kay](https://en.wikipedia.org/wiki/Alan_Kay) based his object oriented programming ideas on biological cells:\n\n[I thought of objects being like biological cells and/or individual computers on a network, only able to communicate with messages (so messaging came at the very beginning -- it took a while to see how to do messaging in a programming language efficiently enough to be useful).](http://www.purl.org/stefan_ram/pub/doc_kay_oop_en)\n\nCan we explain basic molecular biology using a programming language?\n\nThis repository is a draft example aimed to encode some basic biology principles using one of the most popular web language - JavaScript. This code is not meant to be run and far from finished.\n\nStart code exploration from [`index.js`](https://github.com/agentcooper/cell-js/blob/master/index.js). Hint: it is easier to explore code dependencies on GitHub with [OctoLinker](https://chrome.google.com/webstore/detail/octolinker/jlmafbaeoofdegohdhinkhilhclaklkp).\n\nDoes this ideas resonate with you? Drop me a line at artem.tyurin@gmail.com.\n\nFurther reading:\n- https://github.com/Jam3/math-as-code\n- https://en.wikipedia.org/wiki/Automated_theorem_proving\n- https://mitpress.mit.edu/books/structure-and-interpretation-classical-mechanics-0\n- https://moleculamaxima.com/\n- https://github.com/sebgod/physics\n- http://matt.might.net/articles/discrete-math-and-code/\n- https://arxiv.org/pdf/1412.4880.pdf\n- http://progopedia.com/language/chef/\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fagentcooper%2Fcell-js","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fagentcooper%2Fcell-js","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fagentcooper%2Fcell-js/lists"}