{"id":25812207,"url":"https://github.com/aghoshpro/myphd","last_synced_at":"2025-10-14T14:36:08.482Z","repository":{"id":62936415,"uuid":"482535451","full_name":"aghoshpro/myPhD","owner":"aghoshpro","description":"All Codes during PhD at Umea University","archived":false,"fork":false,"pushed_at":"2025-09-19T16:01:18.000Z","size":230052,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-09-19T18:36:59.535Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/aghoshpro.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2022-04-17T13:48:31.000Z","updated_at":"2025-09-19T16:01:24.000Z","dependencies_parsed_at":"2025-04-10T16:47:00.024Z","dependency_job_id":null,"html_url":"https://github.com/aghoshpro/myPhD","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/aghoshpro/myPhD","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aghoshpro%2FmyPhD","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aghoshpro%2FmyPhD/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aghoshpro%2FmyPhD/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aghoshpro%2FmyPhD/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aghoshpro","download_url":"https://codeload.github.com/aghoshpro/myPhD/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aghoshpro%2FmyPhD/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":279019133,"owners_count":26086680,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-10-14T02:00:06.444Z","response_time":60,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-02-28T01:53:09.999Z","updated_at":"2025-10-14T14:36:08.466Z","avatar_url":"https://github.com/aghoshpro.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# myPhD\n\n\u003c!-- [\u003cimg src=\"./PhD-Mind-Map.jpg\"\u003e](https://www.wsnmagazine.com/secrets-for-research-excellence/) --\u003e\n\n[\u003cimg src=\"./research.png\"\u003e](https://www.wsnmagazine.com/secrets-for-research-excellence/)\n\n## Funding\n\n## Environment\n\n### Installing Java SE Platform (JDK 23)\n\n- Download jdk installer from Oracle [website](https://www.oracle.com/in/java/technologies/downloads/) and install default\n- Go to the folder `C:\\Program Files\\Java\\jdk-23\\bin` and copy the path\n- Open **Environmental Variables** and go to the **Path** in the **System Variables**\n- Paste the `C:\\Program Files\\Java\\jdk-23\\bin` in the Path\n- Then create a new system variable called `JAVA_HOME` with the value `C:\\Program Files\\Java\\jdk-23`\n\n- Open `cmd` pr `powershell` and run\n\n  - `java -version`\n\n    ```shell\n    java version \"23.0.1\" 2024-10-15\n    Java(TM) SE Runtime Environment (build 23.0.1+11-39)\n    Java HotSpot(TM) 64-Bit Server VM (build 23.0.1+11-39, mixed mode, sharing)\n    ```\n\n# International Standards\n\n## [W3C](https://www.w3.org/TR/)\n\nThe World Wide Web Consortium (W3C) develops standards and guidelines to help everyone build a web based on the principles of accessibility, internationalization, privacy and security.\n\n1. [SPARQL 1.1](https://www.w3.org/TR/sparql11-overview/)\n2. [RDF](https://w3c-cg.github.io/rdfsurfaces/)\n3. [RDF 1.1](https://www.w3.org/TR/rdf-concepts/)\n\n## [OGC](https://www.ogc.org/publications/)\n\n1. [asGeoJSON](https://defs.opengis.net/vocprez/object?uri=http%3A//www.opengis.net/def/function/geosparql/asGeoJSON) : Converts a given geometry to an equivalent GeoJSON representation. Coordinates are converted to the CRS84 coordinate system, the only valid coordinate system to be used in a GeoJSON literal.\n\n2. [GeoJSON Specs](https://stevage.github.io/geojson-spec/)\n\n## ISO\n\n## Open Street Maps (OSM)\n\n1. [OSM File Formats](https://wiki.openstreetmap.org/wiki/OSM_file_formats)\n2. [osm2pgsql](https://osm2pgsql.org/)\n\n# Relational Data\n\n## Vector Data\n\nRelational data with additional column representing geometric features of real world feature.\n\n- [GDAL Vector Drivers](https://gdal.org/en/latest/drivers/vector/index.html)\n\n1. https://www.statsilk.com/maps/download-free-shapefile-maps\n2. https://gadm.org/data.html\n3. https://www.naturalearthdata.com/downloads/\n4. https://hub.arcgis.com/datasets/esri::world-cities/about\n5. https://arthworks.stanford.edu/\n6. https://www.geonames.org/\n7. https://www.efrainmaps.es/english-version/free-downloads/world/\n8. https://download.geofabrik.de/\n9. https://terraformer-js.github.io/glossary/\n\n### Grammar of Shapefiles\n\n1. https://www.e-education.psu.edu/natureofgeoinfo/c4_p5.html\n2. https://www.loc.gov/preservation/digital/formats/fdd/fdd000280.shtml\n\n### Visualization\n\n1. [GeoJSON.io](https://geojson.io/#map=2/0/20)\n2. [WKT Playground](https://clydedacruz.github.io/openstreetmap-wkt-playground/)\n3. [CovJSON](https://covjson.org/playground/)\n\n## CityGML\n\n- [CityGML](https://www.cityjson.org/) can be represented in [CityJSON](https://www.cityjson.org/)\n\n- CityJSON File [Viewer](https://ninja.cityjson.org/)\n\n### Downloading CityGML data from [OpenDATA](https://geodaten.bayern.de/opengeodata/OpenDataDetail.html?pn=lod2) using GitBash\n\n- Open **GitBash** inside the folder and execute the following shell script `get-munich-citygml.sh` using `$ sh get-munich-citygml.sh`\n\n  ```sh\n  #!/bin/bash\n\n  for LONG in `seq 674 2 680`\n  do\n      for LAT in `seq 5332 2 5342`\n      do\n          wget \"https://download1.bayernwolke.de/a/lod2/citygml/${LONG}_${LAT}.gml\"\n      done\n  done\n  ```\n\n  - Edit the Range of `LONG` and `LAT` to download more gml files\n\n### Converting CityGML to CityJSON\n\n- CityJSON format is much smaller than CityGML for representing city data.\n\n- Follow the instructions at this [page](https://www.cityjson.org/tutorials/conversion/#conversion-citygml---cityjson)\n\n### Merging CityJSON files using _CityJSON/io ([cjio](https://github.com/cityjson/cjio?tab=readme-ov-file)_)\n\n- Convert each `.gml` file to `.city.json` file\n- Go to this [page](https://cjio.readthedocs.io/en/latest/includeme.html)\n- Open cmd and run the following to download `cjio`\n\n  - $` pip install cjio`\n\n  - ```sh\n    Defaulting to user installation because normal site-packages is not writeable\n    Collecting cjio\n      Downloading cjio-0.9.0-py2.py3-none-any.whl.metadata (11 kB)\n    Requirement already satisfied: numpy in c:\\users\\arkag\\appdata\\roaming\\python\\python310\\site-packages (from cjio) (1.23.4)\n    Requirement already satisfied: Click\u003e=8.1.0 in c:\\users\\arkag\\appdata\\roaming\\python\\python310\\site-packages (from cjio) (8.1.7)\n    Requirement already satisfied: colorama in c:\\users\\arkag\\appdata\\roaming\\python\\python310\\site-packages (from Click\u003e=8.1.0-\u003ecjio) (0.4.6)\n    Downloading cjio-0.9.0-py2.py3-none-any.whl (49 kB)\n    Installing collected packages: cjio\n    Successfully installed cjio-0.9.0\n    ```\n\n  - `cjio --help`\n\n  - Usage examples:\n\n    ```sh\n          cjio myfile.city.json info\n          cjio myfile.city.json subset --id house12 save out.city.json\n          cjio myfile.city.json crs_assign 7145 textures_remove export --format obj output.obj\n          cat mystream.city.jsonl | cjio stdin info\n    ```\n\n  - Run the following script to join let's say 4 CityJSON files\n\n    ```sh\n    $ cjio 676_5336.json merge 680_5334.json merge 688_5334.json merge 688_5336.json save out.city.json\n    ```\n\n# Raster Data\n\n- [GDAL Raster Drivers](https://gdal.org/en/latest/drivers/raster/#)\n\n1. Application for Extracting and Exploring Analysis Ready Samples ([AρρEEARS](https://appeears.earthdatacloud.nasa.gov/))\n2. [Copernicus](https://www.copernicus.eu/en/access-data)\n3. [NASA EarthData](https://www.earthdata.nasa.gov/)\n4. [NASA STRM](https://www.earthdata.nasa.gov/data/instruments/srtm)\n5. [SRTM 1 Arc Sec](https://doi.org/10.5066/F7PR7TFT)\n6. [SRTM 30m](https://dwtkns.com/srtm30m/)\n7. [TessaDEM](https://tessadem.com/) is a near-global 30-meter Digital Elevation Model (DEM).\n8. [OpenEO](https://openeo.org/)\n\n### Visualization\n\n1. [Topographic Viewer](https://en-us.topographic-map.com/)\n2. [GeoTIFF Viwer](https://app.geotiff.io/)\n\n# Graph Data\n\n1. [GraphDB](https://graphdb.ontotext.com/documentation/10.8/)\n\n# Experiments\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Faghoshpro%2Fmyphd","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Faghoshpro%2Fmyphd","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Faghoshpro%2Fmyphd/lists"}