{"id":22631964,"url":"https://github.com/alleninstitute/all-active-manuscript","last_synced_at":"2025-06-11T09:32:20.109Z","repository":{"id":37670996,"uuid":"229814076","full_name":"AllenInstitute/All-active-Manuscript","owner":"AllenInstitute","description":"Code for reproducing the figures presented in: Single-neuron models linking electrophysiology, morphology and transcriptomics across cortical cell types","archived":false,"fork":false,"pushed_at":"2023-07-06T22:06:42.000Z","size":52926,"stargazers_count":9,"open_issues_count":2,"forks_count":2,"subscribers_count":3,"default_branch":"master","last_synced_at":"2025-04-11T20:11:27.296Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/AllenInstitute.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2019-12-23T19:50:50.000Z","updated_at":"2025-03-15T17:34:08.000Z","dependencies_parsed_at":"2025-04-11T20:20:31.406Z","dependency_job_id":null,"html_url":"https://github.com/AllenInstitute/All-active-Manuscript","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AllenInstitute%2FAll-active-Manuscript","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AllenInstitute%2FAll-active-Manuscript/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AllenInstitute%2FAll-active-Manuscript/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AllenInstitute%2FAll-active-Manuscript/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/AllenInstitute","download_url":"https://codeload.github.com/AllenInstitute/All-active-Manuscript/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AllenInstitute%2FAll-active-Manuscript/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":259238964,"owners_count":22826832,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-12-09T02:14:41.855Z","updated_at":"2025-06-11T09:32:20.101Z","avatar_url":"https://github.com/AllenInstitute.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"[![Generic badge](https://img.shields.io/badge/License-Allen_Institute-yellow.svg)](https://alleninstitute.org/legal/terms-use/)\n\n# All-active-Manuscript\nCodes for generating figures presented in the All-active manuscript.\n\n![alt text](assets/graphical_abstract/graphical_abstract.png)\n\n## Instructions\nTo run the notebooks set up a conda environment using the following commands:\n```bash\ngit clone https://github.com/AllenInstitute/All-active-Manuscript.git\ncd All-active-Manuscript\nconda env create -f env.yaml\nconda activate allen\n```\n\n## Level of support\nWe are planning on occasional updating this tool with no fixed schedule. Community involvement is encouraged through both issues and pull requests.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Falleninstitute%2Fall-active-manuscript","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Falleninstitute%2Fall-active-manuscript","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Falleninstitute%2Fall-active-manuscript/lists"}