{"id":21591815,"url":"https://github.com/andreaguarracino/wfpoa","last_synced_at":"2025-07-17T01:31:14.602Z","repository":{"id":73393601,"uuid":"302997359","full_name":"AndreaGuarracino/WFPOA","owner":"AndreaGuarracino","description":"An extension to the wavefront algorithm that generalizes it to work on directed acyclic sequence graphs","archived":true,"fork":false,"pushed_at":"2022-02-06T15:27:23.000Z","size":448,"stargazers_count":9,"open_issues_count":0,"forks_count":0,"subscribers_count":5,"default_branch":"main","last_synced_at":"2025-03-28T18:21:23.860Z","etag":null,"topics":["alignment","consensus-sequences","msa","multiple-sequence-alignment","partial-order-alignment","wavefront","wfa"],"latest_commit_sha":null,"homepage":"","language":"C","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/AndreaGuarracino.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2020-10-10T22:03:56.000Z","updated_at":"2024-06-07T14:11:20.000Z","dependencies_parsed_at":"2023-03-11T15:16:01.200Z","dependency_job_id":null,"html_url":"https://github.com/AndreaGuarracino/WFPOA","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/AndreaGuarracino/WFPOA","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AndreaGuarracino%2FWFPOA","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AndreaGuarracino%2FWFPOA/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AndreaGuarracino%2FWFPOA/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AndreaGuarracino%2FWFPOA/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/AndreaGuarracino","download_url":"https://codeload.github.com/AndreaGuarracino/WFPOA/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AndreaGuarracino%2FWFPOA/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":265558434,"owners_count":23787936,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["alignment","consensus-sequences","msa","multiple-sequence-alignment","partial-order-alignment","wavefront","wfa"],"created_at":"2024-11-24T16:33:45.555Z","updated_at":"2025-07-17T01:31:14.591Z","avatar_url":"https://github.com/AndreaGuarracino.png","language":"C","funding_links":[],"categories":[],"sub_categories":[],"readme":"# WFPOA\n\nAn extension to the [wavefront algorithm](https://doi.org/10.1093/bioinformatics/btaa777) that generalizes it to work on\ndirected acyclic sequence graphs.\n\nThis follows the basic formulation of [partial order alignment](https://doi.org/10.1093/bioinformatics/18.3.452),\nwherein the recurrence relations defining alignment are extended to consider the topology of a target graph.\n\nTo build the project:\n\n```shell\ncmake -H. -Bbuild \u0026\u0026 cmake --build build -- -j 16\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fandreaguarracino%2Fwfpoa","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fandreaguarracino%2Fwfpoa","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fandreaguarracino%2Fwfpoa/lists"}