{"id":23057231,"url":"https://github.com/applicativesystem/rust-alignment-viewer","last_synced_at":"2025-08-15T06:32:18.259Z","repository":{"id":264718109,"uuid":"894175554","full_name":"applicativesystem/rust-alignment-viewer","owner":"applicativesystem","description":"rust embedded approach for genome alignments","archived":false,"fork":false,"pushed_at":"2024-12-13T16:50:32.000Z","size":3647,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2024-12-13T17:48:51.246Z","etag":null,"topics":["bioinformatics","genome-alignment","genome-analysis","rust-crate","rust-lang"],"latest_commit_sha":null,"homepage":"","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/applicativesystem.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-11-25T22:19:38.000Z","updated_at":"2024-12-13T16:50:51.000Z","dependencies_parsed_at":"2024-12-13T17:48:55.869Z","dependency_job_id":"5798254e-6767-493d-9528-11fb2383585c","html_url":"https://github.com/applicativesystem/rust-alignment-viewer","commit_stats":null,"previous_names":["applicativesystem/rust-view-aln","applicativesystem/rust-alignment-iewer"],"tags_count":1,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-alignment-viewer","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-alignment-viewer/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-alignment-viewer/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-alignment-viewer/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/applicativesystem","download_url":"https://codeload.github.com/applicativesystem/rust-alignment-viewer/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":229897445,"owners_count":18141135,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","genome-alignment","genome-analysis","rust-crate","rust-lang"],"created_at":"2024-12-16T02:11:37.586Z","updated_at":"2024-12-16T02:11:38.112Z","avatar_url":"https://github.com/applicativesystem.png","language":"Rust","funding_links":[],"categories":[],"sub_categories":[],"readme":"# rust-alignment-viewer\n\n- a embedded colour coded rust visualization approach for the multiple sequence alignment. \n- upgraded this crate to the complete version so that it now allows from the shorter alignments to large scale alignments in one crate. \n- general note: incase of golang and RUST, please see the last commit message and if the message says final and binary released, means code completed else in development phase. \n\n![](https://github.com/applicativesystem/rust-view-aln/blob/master/alignment_spliced_alignment.png)\n\n```\ncargo build\n\n```\n```\nλ gauravsablok rust-alignment-viewer → λ git master* → ./rust-alignment-viewer -h\nUsage: rust-alignment-viewer \u003cALIGNMENT_ARG\u003e [START_ALIGNMENT] [END_ALIGNMENT]\n\nArguments:\n  \u003cALIGNMENT_ARG\u003e    please provide the path to the alignment file\n  [START_ALIGNMENT]  pleasr provide the start of the clipped alignment\n  [END_ALIGNMENT]    please provide the end of the clipped alignment\n\nOptions:\n  -h, --help     Print help\n  -V, --version  Print version\n\n```\n\n```\n  ./target/debug/rust-alignment-viewer ./sample-files/sample.fasta 2 18\n\n```\n\nGaurav Sablok\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-alignment-viewer","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fapplicativesystem%2Frust-alignment-viewer","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-alignment-viewer/lists"}