{"id":23057220,"url":"https://github.com/applicativesystem/rust-bwt-algorithm","last_synced_at":"2025-08-15T06:32:16.068Z","repository":{"id":268172534,"uuid":"903296573","full_name":"applicativesystem/rust-bwt-algorithm","owner":"applicativesystem","description":"rust implementation of Burrows-Wheeler transform","archived":false,"fork":false,"pushed_at":"2024-12-14T21:25:23.000Z","size":1,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2024-12-14T22:25:10.335Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/applicativesystem.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-12-14T08:26:44.000Z","updated_at":"2024-12-14T21:25:27.000Z","dependencies_parsed_at":"2024-12-14T22:25:18.272Z","dependency_job_id":"e86978cb-a0b1-411a-8fda-b8b88d55d5a4","html_url":"https://github.com/applicativesystem/rust-bwt-algorithm","commit_stats":null,"previous_names":["applicativesystem/rust-bwt-algorithm"],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-bwt-algorithm","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-bwt-algorithm/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-bwt-algorithm/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-bwt-algorithm/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/applicativesystem","download_url":"https://codeload.github.com/applicativesystem/rust-bwt-algorithm/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":229897445,"owners_count":18141135,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-12-16T02:11:36.432Z","updated_at":"2024-12-16T02:11:36.922Z","avatar_url":"https://github.com/applicativesystem.png","language":"Rust","funding_links":[],"categories":[],"sub_categories":[],"readme":"# rust-bwt-algorithm\n \n - rust implementation of Burrows-Wheeler transform for long range sequencing as well as the short reads.\n - writing the Burrows-Wheeler transform in RUST all parts separate later for merge into RUST-bowtie.\n - in this i implement a struct based approach so that based on the sorted keys i can push them into a BTreeMap, which will make them on a log scale much faster.  \n - general note: Incase of Golang and RUST, please see the last commit message and if it says compiled binary then it is completed or else still in development version. \n```\ncargo build\n```\n\n```\n➜  rust-bwt-algorithm git:(main) ✗ ./target/debug/rust-bwt-algorithm -h\nUsage: rust-bwt-algorithm \u003cBWT_ARG\u003e\n\nArguments:\n  \u003cBWT_ARG\u003e  please provide the path to the fastq file\n\nOptions:\n  -h, --help     Print help\n  -V, --version  Print version\n``` \n\n Gaurav Sablok\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-bwt-algorithm","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fapplicativesystem%2Frust-bwt-algorithm","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-bwt-algorithm/lists"}