{"id":23057254,"url":"https://github.com/applicativesystem/rust-fastp-sync","last_synced_at":"2025-08-15T06:32:21.784Z","repository":{"id":263860889,"uuid":"891127565","full_name":"applicativesystem/rust-fastp-sync","owner":"applicativesystem","description":"rustic version of fastp each fastp subcommand in a separate multithreaded application","archived":false,"fork":false,"pushed_at":"2024-11-20T17:02:11.000Z","size":6,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2024-11-20T17:41:39.439Z","etag":null,"topics":["bioinformatics","bioinformatics-analysis","genome-analysis","genome-sequencing","illumina","illumina-sequencing"],"latest_commit_sha":null,"homepage":"","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/applicativesystem.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-11-19T19:21:07.000Z","updated_at":"2024-11-20T17:03:29.000Z","dependencies_parsed_at":"2024-11-20T22:33:30.454Z","dependency_job_id":null,"html_url":"https://github.com/applicativesystem/rust-fastp-sync","commit_stats":null,"previous_names":["applicativesystem/rust-fastp"],"tags_count":1,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-fastp-sync","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-fastp-sync/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-fastp-sync/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-fastp-sync/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/applicativesystem","download_url":"https://codeload.github.com/applicativesystem/rust-fastp-sync/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":229897445,"owners_count":18141135,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","bioinformatics-analysis","genome-analysis","genome-sequencing","illumina","illumina-sequencing"],"created_at":"2024-12-16T02:11:43.875Z","updated_at":"2024-12-16T02:11:44.505Z","avatar_url":"https://github.com/applicativesystem.png","language":"Rust","funding_links":[],"categories":[],"sub_categories":[],"readme":"# rust-fastp\n\n- rustic version of fastp each fastp subcommand in a separate multithreaded application\n- this part implements the read sync for the fastp. \n- making each part multihreaded using rayon. \n\n```\ncargo build\n```\n- to check the order\n```\n./target/debug/rust-fastp ./sample-files/ordered-files/samp2_L001_R1_001.fastq \n./sample-files/ordered-files/samp2_L001_R2_001.fastq\n```\n- on unordered files \n```\n./target/debug/rust-fastp ./sample-files/ordered-files/unamp2_L001_R1_001.fastq \n./sample-files/unordered-files/samp2_L001_R2_001.fastq\n```\nGaurav Sablok\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-fastp-sync","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fapplicativesystem%2Frust-fastp-sync","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-fastp-sync/lists"}