{"id":23057239,"url":"https://github.com/applicativesystem/rust-pangenome-harmonic-mean","last_synced_at":"2025-08-15T06:32:18.960Z","repository":{"id":267690906,"uuid":"902060913","full_name":"applicativesystem/rust-pangenome-harmonic-mean","owner":"applicativesystem","description":"rust pangenome harmonic mean","archived":false,"fork":false,"pushed_at":"2024-12-12T19:04:36.000Z","size":3117,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2024-12-12T20:20:23.054Z","etag":null,"topics":["bioinformatics","genome-bioinformatics","pangenome","pangenome-alignment","pangenome-inference"],"latest_commit_sha":null,"homepage":"","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/applicativesystem.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-12-11T20:39:57.000Z","updated_at":"2024-12-12T19:22:02.000Z","dependencies_parsed_at":"2024-12-12T20:20:30.165Z","dependency_job_id":"ca287ce3-8a2f-4f16-b2fe-1b8bdd91b5a1","html_url":"https://github.com/applicativesystem/rust-pangenome-harmonic-mean","commit_stats":null,"previous_names":["applicativesystem/rust-pangenome-weight","applicativesystem/rust-pangenome-harmonic-mean"],"tags_count":1,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-pangenome-harmonic-mean","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-pangenome-harmonic-mean/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-pangenome-harmonic-mean/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-pangenome-harmonic-mean/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/applicativesystem","download_url":"https://codeload.github.com/applicativesystem/rust-pangenome-harmonic-mean/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":229897445,"owners_count":18141135,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","genome-bioinformatics","pangenome","pangenome-alignment","pangenome-inference"],"created_at":"2024-12-16T02:11:38.963Z","updated_at":"2024-12-16T02:11:39.488Z","avatar_url":"https://github.com/applicativesystem.png","language":"Rust","funding_links":[],"categories":[],"sub_categories":[],"readme":"# rust-pangenome-harmonic-mean\n - writing all pangenome tools in rust. \n - This part estimates the harmoninc mean of the given snps across the indiviuals. \n ```\n cargo build\n \n ```\nλ gauravsablok rust-pangenome-harmonic-mean → λ git main* → ./rust-pangenome-harmonic-mean -h\nUsage: rust-pangenome-harmonic-mean \u003cHARMONICMEAN\u003e\n\nArguments:\n  \u003cHARMONICMEAN\u003e  please provide the path to the snp estimation file across the pangenome\n\nOptions:\n  -h, --help     Print help\n  -V, --version  Print version\n\n ```\n\n ```\n - to run the binary\n ```\n  ./rust-pangenome-harmonic-mean ./sample-files/sample.txt \n\n ```\n Gaurav Sablok\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-pangenome-harmonic-mean","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fapplicativesystem%2Frust-pangenome-harmonic-mean","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-pangenome-harmonic-mean/lists"}