{"id":22513342,"url":"https://github.com/applicativesystem/rust-samtools-generateid-range","last_synced_at":"2025-08-03T16:30:52.613Z","repository":{"id":266560299,"uuid":"898314165","full_name":"applicativesystem/rust-samtools-generateid-range","owner":"applicativesystem","description":"rust-samtools generateid range","archived":false,"fork":false,"pushed_at":"2024-12-04T21:33:08.000Z","size":1,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2024-12-04T22:30:33.471Z","etag":null,"topics":["bioinformatics","genome-alignment","genome-analysis","genome-sequence-analysis","indexeddb","rust-lang","samtools"],"latest_commit_sha":null,"homepage":"","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/applicativesystem.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-12-04T07:11:55.000Z","updated_at":"2024-12-04T21:32:39.000Z","dependencies_parsed_at":"2024-12-04T22:40:38.063Z","dependency_job_id":null,"html_url":"https://github.com/applicativesystem/rust-samtools-generateid-range","commit_stats":null,"previous_names":["applicativesystem/rust-samtools-generateid-range"],"tags_count":1,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-samtools-generateid-range","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-samtools-generateid-range/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-samtools-generateid-range/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/applicativesystem%2Frust-samtools-generateid-range/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/applicativesystem","download_url":"https://codeload.github.com/applicativesystem/rust-samtools-generateid-range/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":228552374,"owners_count":17935803,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","genome-alignment","genome-analysis","genome-sequence-analysis","indexeddb","rust-lang","samtools"],"created_at":"2024-12-07T03:11:30.595Z","updated_at":"2024-12-07T03:11:31.124Z","avatar_url":"https://github.com/applicativesystem.png","language":"Rust","funding_links":[],"categories":[],"sub_categories":[],"readme":"# rust-samtools-generateid-range\n \n - rust-samtools generateid range\n - rust samtools generateid range will only generate the fastidx for the specified range for the use with the other rust-samtools. \n - The difference between this and the rust-samtools-generateid is that rust-samtools-generateid for all the identifiers whereas in this you can specify a start and stop coordinate and it will generate only the fastidx for those range and not for the whole sam file. \n - general note: Incase of Golang and RUST, please see the last commit message and if it says compiled binary then it is completed or else still in development version.\n \n ```\n cargo build \n \n ```\n\n ```\n  ./target/debug/rust-samtools-generateid-range \n         ./sample-files/alignreads-metagenomics.sam  540849 613960\n ```\n \n Gaurav Sablok\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-samtools-generateid-range","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fapplicativesystem%2Frust-samtools-generateid-range","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fapplicativesystem%2Frust-samtools-generateid-range/lists"}