{"id":19482507,"url":"https://github.com/aqlaboratory/hsm-web","last_synced_at":"2026-07-22T14:30:19.009Z","repository":{"id":83565447,"uuid":"217409204","full_name":"aqlaboratory/hsm-web","owner":"aqlaboratory","description":"  Website associated with the \"Biophysical prediction of protein-peptide interactions and signaling networks using machine learning.\"","archived":false,"fork":false,"pushed_at":"2020-01-08T19:11:03.000Z","size":566,"stargazers_count":7,"open_issues_count":0,"forks_count":3,"subscribers_count":4,"default_branch":"master","last_synced_at":"2025-01-08T07:26:09.810Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://proteinpeptide.io","language":"HTML","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/aqlaboratory.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2019-10-24T22:55:43.000Z","updated_at":"2023-01-19T20:40:18.000Z","dependencies_parsed_at":"2023-07-03T00:07:16.538Z","dependency_job_id":null,"html_url":"https://github.com/aqlaboratory/hsm-web","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fhsm-web","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fhsm-web/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fhsm-web/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fhsm-web/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory","download_url":"https://codeload.github.com/aqlaboratory/hsm-web/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":240718338,"owners_count":19846478,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-10T20:10:49.419Z","updated_at":"2026-07-22T14:30:18.669Z","avatar_url":"https://github.com/aqlaboratory.png","language":"HTML","funding_links":[],"categories":[],"sub_categories":[],"readme":"# hsm-web - Biophysical prediction of protein-peptide interactions and signaling networks using machine learning.  \n\n\n\u003cimg align=\"left\" src=\"assets/branding/symbol_name.png\" style=\"width: 25%; height: 25%\"/\u003e \n\nThis repository contains the code associated with the website for [Biophysical prediction of protein-peptide interactions and signaling networks using machine learning.](https://doi.org/10.1038/s41592-019-0687-1). The website is located at [proteinpeptide.io](https://proteinpeptide.io). The website depends on downloading pre-processed data from [figshare]() and placing the directories into `assets`.\n\n\n## Reference\nPlease reference the associated publication:\n\nCunningham, J.M., Koytiger, G., Sorger, P.K., \u0026 AlQuraishi, M. \"Biophysical prediction of protein-peptide interactions and signaling networks using machine learning.\" *Nature Methods* (2020). [doi:10.1038/s41592-019-0687-1](https://doi.org/10.1038/s41592-019-0687-1).\n\n### See also\n- Paper code:[aqlaboratory/hsm](https://github.com/aqlaboratory/hsm)\n\n## Credits\n- Protein Viewer: [3Dmol.js](http://3dmol.csb.pitt.edu/)\n- Network Viewer: [D3.js](https://d3js.org/)\n- Styling / Layout: [Bootstrap stack](https://getbootstrap.com/) \n\n## Funding\n\nThis work was supported by the following sources:\n\n| **Funder** | **Grant number** |\n| ---------- | ---------------- |\n| NIH | U54-CA225088 |\n| NIH | P50-GM107618 |\n| DARPA / DOD | W911NF-14-1-0397 |\n\n## License\nThis repository is released under an [MIT License](LICENSE)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Faqlaboratory%2Fhsm-web","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Faqlaboratory%2Fhsm-web","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Faqlaboratory%2Fhsm-web/lists"}