{"id":20837754,"url":"https://github.com/astrazeneca/peptide-tools","last_synced_at":"2025-05-08T20:29:48.640Z","repository":{"id":44942214,"uuid":"397856189","full_name":"AstraZeneca/peptide-tools","owner":"AstraZeneca","description":"Programs to calculate phys-chem properties of synthetic peptides and proteins: isoelectric point and extinction coefficients.","archived":false,"fork":false,"pushed_at":"2025-05-07T14:09:00.000Z","size":754,"stargazers_count":38,"open_issues_count":1,"forks_count":7,"subscribers_count":2,"default_branch":"refactor/peptools","last_synced_at":"2025-05-07T15:25:01.506Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/AstraZeneca.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2021-08-19T07:30:57.000Z","updated_at":"2025-05-07T14:09:03.000Z","dependencies_parsed_at":"2024-05-06T17:57:27.942Z","dependency_job_id":"6e6946d2-9866-48fd-bf4c-f91b5d808a30","html_url":"https://github.com/AstraZeneca/peptide-tools","commit_stats":null,"previous_names":[],"tags_count":22,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AstraZeneca%2Fpeptide-tools","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AstraZeneca%2Fpeptide-tools/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AstraZeneca%2Fpeptide-tools/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AstraZeneca%2Fpeptide-tools/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/AstraZeneca","download_url":"https://codeload.github.com/AstraZeneca/peptide-tools/tar.gz/refs/heads/refactor/peptools","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":252905583,"owners_count":21822827,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-18T01:08:30.479Z","updated_at":"2025-05-08T20:29:48.611Z","avatar_url":"https://github.com/AstraZeneca.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"![Maturity level-0](https://img.shields.io/badge/Maturity%20Level-ML--0-red)\n\npeptide-tools-refactor\n\nOVERVIEW\n    Set of programs to calcaulte phys-chem properties of synthetic peptides and proteins: isoelectic point and extinction coefficients.\n    In total there are 5 scripts/programs there, each can serve as stand alone:\n\n    1) pIChemiSt  \n    program to calcualte isoelectric point of natural and modified peptides. \n\n    2) smi2scrambledfasta  (depends on 1)\n    program to generate the scrambled FASTA sequence from Smiles.\n\n    3) pI_fasta  (depends on 2)\n    program to calcualte isoelecric point using FASTA sequence as an input.\n\n    4) extn_coeff_fasta  (depends on 2)\n    program to calculate extinction coefficients.\n\n    5) peptide_tools_master  (depends on 1,2,3,4)\n    wrapper script for all the programs above. Can run for one compound and for batch submissions.\n\n\nHOW TO RUN \u0026 DEPENDENCIES \n\n    Check the documentaion for each script. \n\nPLATFORM\n\n    Tested on linux CentOS\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fastrazeneca%2Fpeptide-tools","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fastrazeneca%2Fpeptide-tools","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fastrazeneca%2Fpeptide-tools/lists"}