{"id":18256453,"url":"https://github.com/baderlab/singlelivercells","last_synced_at":"2025-04-04T17:32:17.730Z","repository":{"id":146738834,"uuid":"135721809","full_name":"BaderLab/singleLiverCells","owner":"BaderLab","description":"Scripts for processing single liver cells RNA-Seq 10X Genomics Data","archived":false,"fork":false,"pushed_at":"2018-10-17T18:37:20.000Z","size":88575,"stargazers_count":22,"open_issues_count":1,"forks_count":11,"subscribers_count":15,"default_branch":"master","last_synced_at":"2024-03-26T13:45:42.779Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/BaderLab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2018-06-01T13:36:08.000Z","updated_at":"2023-07-14T06:18:31.000Z","dependencies_parsed_at":"2023-10-20T18:14:37.451Z","dependency_job_id":null,"html_url":"https://github.com/BaderLab/singleLiverCells","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BaderLab%2FsingleLiverCells","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BaderLab%2FsingleLiverCells/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BaderLab%2FsingleLiverCells/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BaderLab%2FsingleLiverCells/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BaderLab","download_url":"https://codeload.github.com/BaderLab/singleLiverCells/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":223151767,"owners_count":17096172,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-05T10:21:59.147Z","updated_at":"2024-11-05T10:21:59.632Z","avatar_url":"https://github.com/BaderLab.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"# singleLiverCells\nScripts for processing single liver cells RNA-Seq 10X Genomics Data\n\nThe 20 Clusters of total Liver cells were determined by the package \"Seurat\" in R using the following parameters:\nFindClusters(Data,pc.use=1:29,print.output=F,save.SNN=T,resolution=0.8)\n\nThe 9 Clusters of Immune Cell Subset of Liver were determined by the package \"Seurat\" in R using the following parameters:\nFindClusters(Data,pc.use=1:9,print.output=F,save.SNN=T,resolution=0.4)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbaderlab%2Fsinglelivercells","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbaderlab%2Fsinglelivercells","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbaderlab%2Fsinglelivercells/lists"}