{"id":44292414,"url":"https://github.com/bbquercus/master-thesis","last_synced_at":"2026-02-11T00:04:53.154Z","repository":{"id":118075211,"uuid":"250477402","full_name":"BBQuercus/master-thesis","owner":"BBQuercus","description":"Master thesis in molecular biology at the University of Basel.","archived":false,"fork":false,"pushed_at":"2020-04-22T16:25:41.000Z","size":24059,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-09-09T14:08:46.921Z","etag":null,"topics":["data-visualization","image-analysis","latex","master-thesis","plasmids"],"latest_commit_sha":null,"homepage":"","language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/BBQuercus.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2020-03-27T08:14:16.000Z","updated_at":"2022-01-25T08:25:38.000Z","dependencies_parsed_at":null,"dependency_job_id":"b2ce8856-826e-48c2-9d36-aac1cbf01bbd","html_url":"https://github.com/BBQuercus/master-thesis","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/BBQuercus/master-thesis","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BBQuercus%2Fmaster-thesis","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BBQuercus%2Fmaster-thesis/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BBQuercus%2Fmaster-thesis/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BBQuercus%2Fmaster-thesis/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BBQuercus","download_url":"https://codeload.github.com/BBQuercus/master-thesis/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BBQuercus%2Fmaster-thesis/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":29322733,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-02-10T20:44:44.282Z","status":"ssl_error","status_checked_at":"2026-02-10T20:44:43.393Z","response_time":65,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.6:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["data-visualization","image-analysis","latex","master-thesis","plasmids"],"created_at":"2026-02-11T00:04:51.176Z","updated_at":"2026-02-11T00:04:53.146Z","avatar_url":"https://github.com/BBQuercus.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# master-thesis\n\n### Overview\n\nThis is the official GitHub repository accompanying my Master thesis. It contains the following components:\n\n```\n├── Code               \u003c- Source code used in this project.\n│   ├── *.py           \u003c- Image analysis scripts.\n│   └── Visualization.ipynb \u003c- Jupyter notebook for plotting.\n├── Figures            \u003c- Affinity Designer files to create the figures.\n├── Plasmids           \u003c- Genebank plasmid maps.\n└── Thesis             \u003c- LaTeX files to build the thesis.\n```\n\n\n\n### Details\n\n* **Thesis title**: \"Investigating the stress granule protein G3BP1 with single-molecule imaging of mRNA.\"\n* **Author**: Bastian Th. Eichenberger\n* **Supervisors**: Jeffrey A. Chao and Susan E. Mango\n* **Location**: Friedrich Miescher Institute for Biomedical Research and University of Basel, Switzerland\n* **Degree**: Master of Science in Molecular Biology\n* **Date of submission**: May, 2020\n\n\n\n### Citation\n\n```\n @mastersthesis{EichenbergerThesis,\n      author  = \"Bastian Th. Eichenberger\",\n      title   = \"Investigating the stress granule protein G3BP1 with single-molecule imaging of mRNA.\",\n      school  = \"University of Basel\",\n      year    = 2020,\n      address = \"Basel, Switzerland\",\n      month   = may\n    }\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbbquercus%2Fmaster-thesis","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbbquercus%2Fmaster-thesis","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbbquercus%2Fmaster-thesis/lists"}