{"id":13707522,"url":"https://github.com/bcgov/shinyssdtools","last_synced_at":"2025-05-06T03:31:57.779Z","repository":{"id":41783022,"uuid":"120510270","full_name":"bcgov/shinyssdtools","owner":"bcgov","description":"Shiny interface to ssdtools R package","archived":false,"fork":false,"pushed_at":"2025-03-05T20:44:34.000Z","size":14174,"stargazers_count":8,"open_issues_count":4,"forks_count":4,"subscribers_count":4,"default_branch":"master","last_synced_at":"2025-04-29T15:14:05.458Z","etag":null,"topics":["env","species-sensitivity-distribution","ssd","water-quality-guideline"],"latest_commit_sha":null,"homepage":"https://bcgov.github.io/shinyssdtools/","language":"HTML","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bcgov.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS.md","contributing":".github/CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":".github/CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":".github/SUPPORT.md","governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2018-02-06T19:11:24.000Z","updated_at":"2025-03-05T20:40:44.000Z","dependencies_parsed_at":"2024-12-24T02:30:39.259Z","dependency_job_id":"a09364c8-e9ea-4f77-a952-ba13ac5ba87d","html_url":"https://github.com/bcgov/shinyssdtools","commit_stats":{"total_commits":479,"total_committers":10,"mean_commits":47.9,"dds":"0.25678496868475986","last_synced_commit":"ae06126fe128406d7fe3144576270aeb2ea4f456"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bcgov%2Fshinyssdtools","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bcgov%2Fshinyssdtools/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bcgov%2Fshinyssdtools/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bcgov%2Fshinyssdtools/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bcgov","download_url":"https://codeload.github.com/bcgov/shinyssdtools/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":252231166,"owners_count":21715474,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["env","species-sensitivity-distribution","ssd","water-quality-guideline"],"created_at":"2024-08-02T22:01:34.136Z","updated_at":"2025-05-06T03:31:57.774Z","avatar_url":"https://github.com/bcgov.png","language":"HTML","funding_links":[],"categories":["HTML","Biosphere"],"sub_categories":["Species Distribution Modeling"],"readme":"---\noutput: github_document\n---\n\n\u003c!-- README.md is generated from README.Rmd. Please edit that file --\u003e\n\n```{r, include = FALSE}\nknitr::opts_chunk$set(\n  collapse = TRUE,\n  comment = \"#\u003e\",\n  fig.path = \"man/figures/README-\",\n  out.width = \"100%\"\n)\n```\n\n# shinyssdtools\n\n\u003c!-- badges: start --\u003e\n[![Lifecycle: maturing](https://img.shields.io/badge/Lifecycle-Maturing-007EC6)](https://github.com/bcgov/repomountie/blob/master/doc/lifecycle-badges.md)\n[![R-CMD-check](https://github.com/bcgov/shinyssdtools/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/bcgov/shinyssdtools/actions/workflows/R-CMD-check.yaml)\n[![Apache license](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0)\n[![DOI](https://joss.theoj.org/papers/10.21105/joss.02848/status.svg)](https://doi.org/10.21105/joss.02848)\n\u003c!-- badges: end --\u003e\n\n`shinyssdtools` is a Shiny application for fitting Species Sensitivity Distributions (SSDs) using [`ssdtools`](https://github.com/bcgov/ssdtools).\n\n## Utilization\n\nThe most recent version is available online at \u003chttps://bcgov-env.shinyapps.io/ssdtools/\u003e.\n\nTo install the development version from [GitHub](https://github.com/bcgov/shinyssdtools) and deploy locally use\n\n``` r\n# install.packages(\"devtools\")\ndevtools::install_github(\"bcgov/shinyssdtools\")\nlibrary(shinyssdtools)\nshinyssdtools::run_app()\n```\n\n## Features\n\nIn addition to being a Graphical User Interface to the core functionality in the [`ssdtools`](https://github.com/bcgov/ssdtools) package, `shinyssdtools` also provides \n\n- a bilingual (English/French) interface;\n- generation of R scripts for reproducibility;\n- customization and downloads of plots and tables\n- Generation of html/pdf report\n\n## Information\n\nFor more information including how to cite `shinyssdtools` see [Dalgarno (2021)](https://doi.org/10.21105/joss.02848).\n\nFor a review of `ssdtools` and `shinysddtools` in the context of other SSD software packages see [Fox et al. (2021)](https://onlinelibrary.wiley.com/doi/10.1002/etc.4925).\n\n## Assistance\n\nTo report bugs/issues/feature requests, please file an [issue](https://github.com/bcgov/shinyssdtools/issues/).\n\n## Contribution\n\nIf you would like to contribute, please see our [CONTRIBUTING](CONTRIBUTING.md) guidelines.\n\nPlease note that this project is released with a [Contributor Code of Conduct](https://github.com/bcgov/shinyssdtools/blob/master/.github/CONTRIBUTING.md). By participating in this project you agree to abide by its terms.\n\n## Deploying to shinyapps.io\n\n### Manually\n\nRun the `deploy-app.R` script in the scripts directory (after setting the account argument to be your `shinyapps.io` account name).\n\n### Automatically\n\nIf your `shinyapps.io` account name is the same as your GitHub account name simply make a commit in the master or dev branch and include `deploy app` in the message \n(after setting `SHINYAPPS_TOKEN` and `SHINYAPPS_SECRET` in your repository GitHub secrets). \nThis triggers the `deploy-app.yml` GitHub action.\n\n## License\n\nThe code is released under the Apache License 2.0\n\nCopyright 2021 Province of British Columbia\n\nLicensed under the Apache License, Version 2.0 (the \"LICENSE\");\nyou may not use this file except in compliance with the License.\nYou may obtain a copy of the License at \n\nhttp://www.apache.org/licenses/LICENSE-2.0\n\nUnless required by applicable law or agreed to in writing, software\ndistributed under the License is distributed on an \"AS IS\" BASIS,\nWITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\nSee the License for the specific language governing permissions and\nlimitations under the License.\n\n-----\n\n\u003ca rel=\"LICENSE\" href=\"https://creativecommons.org/licenses/by/4.0/\"\u003e\u003cimg alt=\"Creative Commons Licence\"\nstyle=\"border-width:0\" src=\"https://i.creativecommons.org/l/by/4.0/80x15.png\" /\u003e\u003c/a\u003e\u003cbr /\u003e\u003cspan\nxmlns:dct=\"http://purl.org/dc/terms/\" property=\"dct:title\"\u003essdtools\u003c/span\u003e by \u003cspan\nxmlns:cc=\"http://creativecommons.org/ns#\" property=\"cc:attributionName\"\u003ethe Province of British Columbia\n\u003c/span\u003e is licensed under a \u003ca rel=\"LICENSE\" href=\"https://creativecommons.org/licenses/by/4.0/\"\u003e\nCreative Commons Attribution 4.0 International License\u003c/a\u003e.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbcgov%2Fshinyssdtools","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbcgov%2Fshinyssdtools","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbcgov%2Fshinyssdtools/lists"}