{"id":17646992,"url":"https://github.com/bencardoen/singularity_julia","last_synced_at":"2025-09-07T07:34:58.691Z","repository":{"id":77438566,"uuid":"448641647","full_name":"bencardoen/singularity_julia","owner":"bencardoen","description":"Template definition file for Singularity RO containers with Julia and user package embedded.","archived":false,"fork":false,"pushed_at":"2022-01-16T19:13:40.000Z","size":19,"stargazers_count":3,"open_issues_count":0,"forks_count":0,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-02-05T10:49:35.101Z","etag":null,"topics":["container","definition-file","hpc-clusters","julia","julia-language","singularity","singularity-container"],"latest_commit_sha":null,"homepage":"","language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"agpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bencardoen.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2022-01-16T18:40:57.000Z","updated_at":"2024-08-30T09:14:58.000Z","dependencies_parsed_at":null,"dependency_job_id":"347f8f86-0d4d-4db6-8b7e-592cc487375a","html_url":"https://github.com/bencardoen/singularity_julia","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bencardoen%2Fsingularity_julia","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bencardoen%2Fsingularity_julia/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bencardoen%2Fsingularity_julia/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bencardoen%2Fsingularity_julia/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bencardoen","download_url":"https://codeload.github.com/bencardoen/singularity_julia/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":246296583,"owners_count":20754632,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["container","definition-file","hpc-clusters","julia","julia-language","singularity","singularity-container"],"created_at":"2024-10-23T11:09:26.769Z","updated_at":"2025-03-30T08:41:29.143Z","avatar_url":"https://github.com/bencardoen.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# README\nContains a template to create a [Singularity](https://sylabs.io/guides/3.5/user-guide/) Julia container with 1.7.1 on Fedora 35, with a user specified package pre-installed. \n\nUse case : you're sharing private or public work but don't want your users to have to install Julia, deal with dependencies etc.\n\n## Usage\n```bash\nsudo singularity build myimage.sif singularity_template.def\n```\nAfter creation:\n```bash\nsingularity exec myimage.sif julia --project=/opt/MyPackage.jl\n```\n\n```bash\nsingularity shell myimage.sif\nSingularity\u003ejulia --project=/opt/MyPackage.jl\n```\n\n## Notes\n- This sets the JULIA_DEPOT_PATH variable (inside the container) to a container folder, to ensure we're using the environment **inside** the container, not outside. \nIf you prefer to use the outside Julia env, remove the depot path steps, but note this will write to ~/.julia.\n- Julia interactive use will write to *logs*, in order to enable this without making the container writable, we map the log directory to /dev/shm (tmpfs on Linux), which by POSIX should exist and be user writable. For execution of scripts you do not need this, so you could omit it.\n\n## Customizing\nReplace MyPackage.jl with your own package. Optionally add extra dependencies (dnf or conda, ...).\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbencardoen%2Fsingularity_julia","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbencardoen%2Fsingularity_julia","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbencardoen%2Fsingularity_julia/lists"}