{"id":15761261,"url":"https://github.com/benmaier/boarding_school_sir","last_synced_at":"2025-03-31T09:22:56.225Z","repository":{"id":66124024,"uuid":"131202768","full_name":"benmaier/boarding_school_SIR","owner":"benmaier","description":"Fit SIR dynamics to the prevalence curve of an H1N1 outbreak of a British boarding school in 1978.","archived":false,"fork":false,"pushed_at":"2018-04-26T20:32:31.000Z","size":61,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2024-10-11T11:06:20.082Z","etag":null,"topics":["boarding","data","disease","epidemiology","modeling","school","spreading"],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/benmaier.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2018-04-26T19:42:11.000Z","updated_at":"2022-10-26T20:57:25.000Z","dependencies_parsed_at":"2023-04-01T14:18:56.681Z","dependency_job_id":null,"html_url":"https://github.com/benmaier/boarding_school_SIR","commit_stats":{"total_commits":8,"total_committers":1,"mean_commits":8.0,"dds":0.0,"last_synced_commit":"6bac1711253b3b5b4397ccca31b739a0c06a0fd1"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/benmaier%2Fboarding_school_SIR","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/benmaier%2Fboarding_school_SIR/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/benmaier%2Fboarding_school_SIR/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/benmaier%2Fboarding_school_SIR/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/benmaier","download_url":"https://codeload.github.com/benmaier/boarding_school_SIR/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":246444078,"owners_count":20778352,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["boarding","data","disease","epidemiology","modeling","school","spreading"],"created_at":"2024-10-04T11:02:02.890Z","updated_at":"2025-03-31T09:22:56.206Z","avatar_url":"https://github.com/benmaier.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Influenza at a British Boarding School\n\nIn January 1978, a boarding school hosting `N = 763` boys in northern England had an outbreak of influenza H1N1. For details see \n[Influenza in a boarding school, British Medical Journal, 4 March 1978](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1603269/pdf/brmedj00115-0064.pdf).\n\nYou can find the temporal prevalence data in the file `british_boarding_school.txt`. The data was extracted from the original figure using [EasyNData](https://www.physik.hu-berlin.de/de/pep/tools) and is hence not exact.\n\nUsing the program `boarding.py` one can fit an SIR-system to the data using a transmission rate `1.66/day` and a recovery rate of `1/(2.2 days)` as described in \n[Modeling Infectious Diseases in Humans and Animals, Matt J. Keeling \u0026 Pejman Rohani](https://press.princeton.edu/titles/8459.html).\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbenmaier%2Fboarding_school_sir","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbenmaier%2Fboarding_school_sir","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbenmaier%2Fboarding_school_sir/lists"}