{"id":15761310,"url":"https://github.com/benmaier/reaction-diffusion","last_synced_at":"2025-04-30T22:23:48.000Z","repository":{"id":66124034,"uuid":"161808712","full_name":"benmaier/reaction-diffusion","owner":"benmaier","description":"Some Python examples to obtain reaction-diffusion results and animations.","archived":false,"fork":false,"pushed_at":"2018-12-17T21:06:58.000Z","size":54359,"stargazers_count":86,"open_issues_count":0,"forks_count":20,"subscribers_count":4,"default_branch":"master","last_synced_at":"2024-10-11T11:06:24.217Z","etag":null,"topics":["matplotlib-animation","python3","reaction-diffusion"],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/benmaier.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2018-12-14T16:01:14.000Z","updated_at":"2024-08-31T05:37:02.000Z","dependencies_parsed_at":"2023-04-13T03:05:24.646Z","dependency_job_id":null,"html_url":"https://github.com/benmaier/reaction-diffusion","commit_stats":{"total_commits":16,"total_committers":1,"mean_commits":16.0,"dds":0.0,"last_synced_commit":"ce9be6121d36740235c9a152ebdd191f164e784f"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/benmaier%2Freaction-diffusion","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/benmaier%2Freaction-diffusion/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/benmaier%2Freaction-diffusion/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/benmaier%2Freaction-diffusion/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/benmaier","download_url":"https://codeload.github.com/benmaier/reaction-diffusion/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":251790391,"owners_count":21644212,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["matplotlib-animation","python3","reaction-diffusion"],"created_at":"2024-10-04T11:02:14.895Z","updated_at":"2025-04-30T22:23:47.979Z","avatar_url":"https://github.com/benmaier.png","language":"Jupyter Notebook","readme":"# Reaction-Diffusion simulations\n\nThis repository contains some Python examples to obtain\nreaction-diffusion results and animations as the one shown below.\n\nFor an explanation/tutorial, see the [Jupyter notebook](https://github.com/benmaier/reaction-diffusion/blob/master/gray_scott.ipynb)\nand also the one [with animations attached](https://github.com/benmaier/reaction-diffusion/blob/master/gray_scott_with_animations.ipynb).\n\n![gray-scott-animation](https://raw.githubusercontent.com/benmaier/reaction-diffusion/master/img/gray_scott.gif)\n\n## References\n\n* Tutorial on Reaction-Diffusion http://www.karlsims.com/rd.html\n* Gray-Scott model http://mrob.com/pub/comp/xmorphia/\n* online Gray-Scott model: https://mrob.com/pub/comp/xmorphia/ogl/index.html\n* Tutorial on animations in matplotlib https://matplotlib.org/examples/animation/dynamic_image.html\n* A numerically more sophisticated implementation but without animation: https://rajeshrinet.github.io/blog/2016/gray-scott/\n* show animations in notebooks 0: http://louistiao.me/posts/notebooks/embedding-matplotlib-animations-in-jupyter-as-interactive-javascript-widgets/\n* show animations in notebooks 1: http://louistiao.me/posts/notebooks/embedding-matplotlib-animations-in-jupyter-notebooks/\n* write animation to a file: https://matplotlib.org/2.1.2/gallery/animation/basic_example_writer_sgskip.html\n* make a gif from video https://superuser.com/questions/556029/how-do-i-convert-a-video-to-gif-using-ffmpeg-with-reasonable-quality\n","funding_links":[],"categories":[],"sub_categories":[],"project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbenmaier%2Freaction-diffusion","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbenmaier%2Freaction-diffusion","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbenmaier%2Freaction-diffusion/lists"}