{"id":20934620,"url":"https://github.com/biocore/emperor","last_synced_at":"2025-04-06T07:14:04.063Z","repository":{"id":6517474,"uuid":"7758329","full_name":"biocore/emperor","owner":"biocore","description":"Emperor a tool for the analysis and visualization of large microbial ecology datasets","archived":false,"fork":false,"pushed_at":"2024-01-09T01:16:33.000Z","size":30094,"stargazers_count":54,"open_issues_count":62,"forks_count":46,"subscribers_count":10,"default_branch":"master","last_synced_at":"2025-03-30T06:05:33.307Z","etag":null,"topics":["bioinformatics","biplots","emperor","microbiome","ordination","python","visualization"],"latest_commit_sha":null,"homepage":"http://biocore.github.io/emperor/","language":"JavaScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/biocore.png","metadata":{"files":{"readme":"README.md","changelog":"ChangeLog.md","contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2013-01-22T18:27:18.000Z","updated_at":"2025-01-15T02:10:24.000Z","dependencies_parsed_at":"2024-06-19T20:02:42.678Z","dependency_job_id":"85d40d5c-e1b0-42ce-b9a7-0bc674bdd074","html_url":"https://github.com/biocore/emperor","commit_stats":{"total_commits":774,"total_committers":18,"mean_commits":43.0,"dds":"0.23772609819121449","last_synced_commit":"fcb4735c73d3e0f24c4127c9d5e07ca5ee020e58"},"previous_names":[],"tags_count":31,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biocore%2Femperor","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biocore%2Femperor/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biocore%2Femperor/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biocore%2Femperor/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/biocore","download_url":"https://codeload.github.com/biocore/emperor/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":247445672,"owners_count":20939960,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bioinformatics","biplots","emperor","microbiome","ordination","python","visualization"],"created_at":"2024-11-18T22:10:05.422Z","updated_at":"2025-04-06T07:14:04.047Z","avatar_url":"https://github.com/biocore.png","language":"JavaScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"Emperor\n=======\n\n[![Join the chat at https://gitter.im/biocore/emperor](https://badges.gitter.im/Join%20Chat.svg)](https://gitter.im/biocore/emperor?utm_source=badge\u0026utm_medium=badge\u0026utm_campaign=pr-badge\u0026utm_content=badge) [![](https://github.com/biocore/emperor/workflows/Emperor%20CI/badge.svg)](https://github.com/biocore/emperor/actions) [![Coverage Status](https://coveralls.io/repos/biocore/emperor/badge.svg)](https://coveralls.io/r/biocore/emperor)\n\nEmperor is a next-generation tool for the analysis and visualization of large microbial ecology datasets. Amongst its many features, Emperor provides a modern user interface that can be rapidly adjusted to your data analysis workflow.\n\nTo start using Emperor, please refer to the [installation notes](INSTALL.md).\n\nBefore contributing code to Emperor, please familiarize yourself with the [contributing guidelines](CONTRIBUTING.md).\n\n## Usage\n\nYou can start using Emperor through [QIIME 2](https://qiime2.org)'s [interfaces](https://docs.qiime2.org/2021.2/interfaces/) (the command line or the graphical user interface), or alternatively using the Python interface (compatible with the Jupyter notebook, see [this example](http://nbviewer.jupyter.org/github/biocore/emperor/blob/new-api/examples/keyboard.ipynb)). For more details, refer to our [online documentation](http://emperor.microbio.me).\n\n## Publications\n\n- [EMPeror: a tool for visualizing high-throughput microbial community data](https://www.ncbi.nlm.nih.gov/pubmed/24280061). GigaScience, 2013.\n\n- [Bringing the Dynamic Microbiome to Life with Animations](https://www.ncbi.nlm.nih.gov/pubmed/28081445). Cell Host \u0026 Microbe, 2016.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbiocore%2Femperor","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbiocore%2Femperor","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbiocore%2Femperor/lists"}