{"id":30227008,"url":"https://github.com/biolab/orange3-survival-analysis","last_synced_at":"2025-10-10T01:03:57.464Z","repository":{"id":41953669,"uuid":"318492208","full_name":"biolab/orange3-survival-analysis","owner":"biolab","description":"🍊 :heavy_plus_sign: Survival Analysis add-on for Orange3 data mining suite.","archived":false,"fork":false,"pushed_at":"2024-03-22T08:26:18.000Z","size":4147,"stargazers_count":3,"open_issues_count":3,"forks_count":3,"subscribers_count":8,"default_branch":"master","last_synced_at":"2025-09-17T03:01:59.308Z","etag":null,"topics":["cox-regression","kaplan-meier-plot","survival-analysis"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/biolab.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":null,"funding":".github/FUNDING.yml","license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null},"funding":{"github":"biolab"}},"created_at":"2020-12-04T11:13:39.000Z","updated_at":"2025-01-05T22:18:28.000Z","dependencies_parsed_at":"2023-02-17T19:45:57.123Z","dependency_job_id":"6c151e10-1704-4cd8-9ea4-8b826a1ac014","html_url":"https://github.com/biolab/orange3-survival-analysis","commit_stats":{"total_commits":121,"total_committers":5,"mean_commits":24.2,"dds":"0.14049586776859502","last_synced_commit":"7d424c340840bc3159ed156f0e742b39c6c420da"},"previous_names":[],"tags_count":10,"template":false,"template_full_name":null,"purl":"pkg:github/biolab/orange3-survival-analysis","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biolab%2Forange3-survival-analysis","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biolab%2Forange3-survival-analysis/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biolab%2Forange3-survival-analysis/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biolab%2Forange3-survival-analysis/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/biolab","download_url":"https://codeload.github.com/biolab/orange3-survival-analysis/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/biolab%2Forange3-survival-analysis/sbom","scorecard":{"id":25923,"data":{"date":"2025-08-11","repo":{"name":"github.com/biolab/orange3-survival-analysis","commit":"ec581723b11aae683669650f6681f3e6c91ba6e8"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":3.2,"checks":[{"name":"Dangerous-Workflow","score":10,"reason":"no dangerous workflow patterns detected","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Code-Review","score":1,"reason":"Found 3/20 approved changesets -- score normalized to 1","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Maintained","score":0,"reason":"0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Token-Permissions","score":0,"reason":"detected GitHub workflow tokens with excessive permissions","details":["Warn: no topLevel permission defined: .github/workflows/lint.yml:1","Warn: no topLevel permission defined: .github/workflows/rebase.yml:1","Warn: no topLevel permission defined: .github/workflows/release.yml:1","Warn: no topLevel permission defined: .github/workflows/test.yml:1","Info: no jobLevel write permissions found"],"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Vulnerabilities","score":10,"reason":"0 existing vulnerabilities detected","details":null,"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE:0","Info: FSF or OSI recognized license: GNU General Public License v3.0: LICENSE:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Pinned-Dependencies","score":0,"reason":"dependency not pinned by hash detected -- score normalized to 0","details":["Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/lint.yml:19: update your workflow using https://app.stepsecurity.io/secureworkflow/biolab/orange3-survival-analysis/lint.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/lint.yml:21: update your workflow using https://app.stepsecurity.io/secureworkflow/biolab/orange3-survival-analysis/lint.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/rebase.yml:7: update your workflow using https://app.stepsecurity.io/secureworkflow/biolab/orange3-survival-analysis/rebase.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:9: update your workflow using https://app.stepsecurity.io/secureworkflow/biolab/orange3-survival-analysis/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/test.yml:13: update your workflow using https://app.stepsecurity.io/secureworkflow/biolab/orange3-survival-analysis/test.yml/master?enable=pin","Warn: pipCommand not pinned by hash: .github/workflows/lint.yml:27","Info:   0 out of   2 GitHub-owned GitHubAction dependencies pinned","Info:   0 out of   3 third-party GitHubAction dependencies pinned","Info:   0 out of   1 pipCommand dependencies pinned"],"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"Signed-Releases","score":0,"reason":"Project has not signed or included provenance with any releases.","details":["Warn: release artifact 0.6.1 not signed: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/147862949","Warn: release artifact Release-0.6.0 not signed: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/133171990","Warn: release artifact 0.5.1 not signed: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/89708733","Warn: release artifact 0.5.0 not signed: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/85145729","Warn: release artifact 0.4.0 not signed: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/63447761","Warn: release artifact 0.6.1 does not have provenance: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/147862949","Warn: release artifact Release-0.6.0 does not have provenance: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/133171990","Warn: release artifact 0.5.1 does not have provenance: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/89708733","Warn: release artifact 0.5.0 does not have provenance: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/85145729","Warn: release artifact 0.4.0 does not have provenance: https://api.github.com/repos/biolab/orange3-survival-analysis/releases/63447761"],"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 16 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}}]},"last_synced_at":"2025-08-14T17:52:11.836Z","repository_id":41953669,"created_at":"2025-08-14T17:52:11.836Z","updated_at":"2025-08-14T17:52:11.836Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":279002411,"owners_count":26083373,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-10-09T02:00:07.460Z","response_time":59,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["cox-regression","kaplan-meier-plot","survival-analysis"],"created_at":"2025-08-14T17:38:45.416Z","updated_at":"2025-10-10T01:03:57.447Z","avatar_url":"https://github.com/biolab.png","language":"Python","funding_links":["https://github.com/sponsors/biolab"],"categories":[],"sub_categories":[],"readme":"\u003ch1 align=\"center\"\u003eOrange3-Survival-Analysis\u003c/h1\u003e\n\n\n\u003cp align=\"center\"\u003e\n\u003ca href=\"https://github.com/biolab/orange3-survival-analysis/actions\"\u003e\u003cimg alt=\"Actions Status\" src=\"https://github.com/biolab/orange3-survival-analysis/actions/workflows/test.yml/badge.svg\"\u003e\u003c/a\u003e\n\u003ca href=\"https://orange3-survival-analysis.readthedocs.io/en/stable/?badge=stable\"\u003e\u003cimg alt=\"Documentation Status\" src=\"https://readthedocs.org/projects/orange3-survival-analysis/badge/?version=stable\"\u003e\u003c/a\u003e\n\u003ca href=\"https://codecov.io/gh/biolab/orange3-survival-analysis\"\u003e\u003cimg alt=\"Coverage Status\" src=\"https://codecov.io/gh/biolab/orange3-survival-analysis/branch/master/graph/badge.svg?token=H8PQO96TJJ\"\u003e\u003c/a\u003e\n\u003ca href=\"https://pypi.org/project/Orange3-Survival-Analysis/\"\u003e\u003cimg alt=\"PyPI\" src=\"https://img.shields.io/pypi/v/orange3-survival-analysis?color=blue\"\u003e\u003c/a\u003e\n\u003ca href=\"https://anaconda.org/conda-forge/orange3-survival-analysis/\"\u003e\u003cimg alt=\"conda-forge\" src=\"https://anaconda.org/conda-forge/orange3-survival-analysis/badges/version.svg\"\u003e\u003c/a\u003e\n\u003ca href=\"https://zenodo.org/badge/latestdoi/318492208\"\u003e\u003cimg src=\"https://zenodo.org/badge/318492208.svg\" alt=\"DOI\"\u003e\u003c/a\u003e\n\u003c/p\u003e\n\n![Example Workflow](doc/readme-screenshot.png)\n\nSurvival analysis add-on for the [Orange](http://orange.biolab.si)\ndata mining suite. For more see the [widget documentation](https://orangedatamining.com/widget-catalog/survival-analysis/kaplan-meier-plot/)\nand [example workflows](https://orangedatamining.com/workflows/Survival-Analysis/).\n\n\nBlog posts:\n- [An introduction to the Kaplan-Meier Estimator](https://orangedatamining.com/blog/2022/2022-05-25-KaplanMeier/)\n- [Cox regression in Orange](https://orangedatamining.com/blog/2023/2023-01-27-cox-regression-in-orange/)\n\n\n# Easy installation\n\nFirst, [download](https://orange.biolab.si/download) the latest Orange release from\nour website. Then, to install the survival analysis add-on, head to\n`Options -\u003e Add-ons...` in the menu bar.\n\n# For developers\n\n\nIf you would like to install from cloned git repository, run\n\n    pip install .\n\nTo register this add-on with Orange, but keep the code in the development directory\n(do not copy it to Python's site-packages directory), run\n\n    pip install -e .\n\n\n###  Usage\n\nAfter the installation, the widget from this add-on is registered with Orange. To run Orange from the terminal,\nuse\n\n    orange-canvas\n\nor\n\n    python -m Orange.canvas\n\nThe new widget appears in the toolbox bar under the section Survival Analysis.\nStarting up for the first time may take a while.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbiolab%2Forange3-survival-analysis","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbiolab%2Forange3-survival-analysis","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbiolab%2Forange3-survival-analysis/lists"}