{"id":18666763,"url":"https://github.com/bionode/bionode-go","last_synced_at":"2025-04-11T23:33:16.056Z","repository":{"id":24344658,"uuid":"27742534","full_name":"bionode/bionode-go","owner":"bionode","description":"Gene Ontology in Bionode (WIP)","archived":false,"fork":false,"pushed_at":"2017-06-01T22:41:58.000Z","size":7,"stargazers_count":7,"open_issues_count":0,"forks_count":3,"subscribers_count":23,"default_branch":"master","last_synced_at":"2024-08-09T20:28:27.951Z","etag":null,"topics":["api-client","bioinformatics","bionode","nodejs","tool"],"latest_commit_sha":null,"homepage":"bionode.io","language":"JavaScript","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bionode.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2014-12-09T00:48:52.000Z","updated_at":"2018-11-09T15:25:03.000Z","dependencies_parsed_at":"2022-07-24T01:16:08.570Z","dependency_job_id":null,"html_url":"https://github.com/bionode/bionode-go","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bionode%2Fbionode-go","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bionode%2Fbionode-go/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bionode%2Fbionode-go/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bionode%2Fbionode-go/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bionode","download_url":"https://codeload.github.com/bionode/bionode-go/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":223484679,"owners_count":17153045,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["api-client","bioinformatics","bionode","nodejs","tool"],"created_at":"2024-11-07T08:33:59.592Z","updated_at":"2024-11-07T08:34:00.271Z","avatar_url":"https://github.com/bionode.png","language":"JavaScript","funding_links":[],"categories":[],"sub_categories":[],"readme":"bionode-go\n==========\n\nGene Ontology in Bionode\n\nWill provide access to the public MySQL services of the Gene Ontology.\n\nHave a look at go.js how to use go\\_gene\\_annotation.js to retrieve GO annotations for a particular gene. It's not much, but it's a start for your own explorations. All of GO can be queried via internet access to their MySQL server. Details and sample queries available here: http://amigo.geneontology.org/goose\n\u003cbr\u003e\n\n\u003cb\u003eNote:\u003c/b\u003e Another quick and dirty way to associate GO terms to target genes is the use of InterMine via their npm module. Alex from FlyMine wrote on 11/12/2014: \"Sorry about the lack of good doc links on the NPM page - our API docs\nare here: http://intermine.github.io/imjs/, and http://alexkalderimis.github.io/imjs/ (mine are sometimes\na little ahead of intermine's). I will make sure that they are more\ndiscoverable in the future.\n\nWe also have some documentation here:\nhttp://intermine.readthedocs.org/en/latest/web-services/#api-and-client-libraries\n\nWith some examples here:\nhttp://intermine.readthedocs.org/en/latest/web-services/how-do-i/#howtows\n\nIf there are some examples you want to see, just let us know, and we\nwill add them to the how-do-I section.\"\n\nAll best,\n\nAlex Kalderimis\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbionode%2Fbionode-go","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbionode%2Fbionode-go","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbionode%2Fbionode-go/lists"}