{"id":20956444,"url":"https://github.com/bluebrain/subcellular-suite","last_synced_at":"2025-12-27T19:51:30.110Z","repository":{"id":144629834,"uuid":"566890189","full_name":"BlueBrain/subcellular-suite","owner":"BlueBrain","description":null,"archived":false,"fork":false,"pushed_at":"2022-11-17T08:58:32.000Z","size":2,"stargazers_count":3,"open_issues_count":0,"forks_count":2,"subscribers_count":3,"default_branch":"main","last_synced_at":"2025-01-19T23:38:38.255Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/BlueBrain.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2022-11-16T16:22:45.000Z","updated_at":"2025-01-10T22:57:30.000Z","dependencies_parsed_at":null,"dependency_job_id":"b6ed0a6d-d707-4517-9bb7-b580f696f41f","html_url":"https://github.com/BlueBrain/subcellular-suite","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BlueBrain%2Fsubcellular-suite","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BlueBrain%2Fsubcellular-suite/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BlueBrain%2Fsubcellular-suite/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BlueBrain%2Fsubcellular-suite/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BlueBrain","download_url":"https://codeload.github.com/BlueBrain/subcellular-suite/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":243352037,"owners_count":20276916,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-19T01:26:01.619Z","updated_at":"2025-12-27T19:51:30.072Z","avatar_url":"https://github.com/BlueBrain.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# Subcellular Suite\n\nA suite to simulate and visualize brain molecular networks.\n\n- [BlueNaaS-Subcellular](#bluenaas-subcellular) — A web environment for the simulation of brain molecular networks.\n- [BluePySubcellular](#bluepysubcellular) — A Python interface to BlueNaaS-Subcellular.\n\n\n## BlueNaaS-Subcellular\n\u003cimg alt=\"BlueNaaS-Subcellular Banner\" src=\"https://github.com/BlueBrain/BlueNaaS-Subcellular/raw/main/BPP-BlueNaaS-Subcellular-Github.jpg\" width=\"600\"/\u003e\n\nUseful links:\n[GitHub repo](https://github.com/bluebrain/BlueNaaS-Subcellular),\n[Documentation](https://github.com/bluebrain/bluenaas-subcellular#readme).\n\n**A web environment for the simulation of brain molecular networks.**\n\nBlueNaaS-Subcellular is a software environment for the simulation of brain molecular networks. \nIt aims to integrate several existing tools such as STEPs, and BioNetGen into an intuitive web interface. \nIt allows users to import or define models and run simulations. It includes some visualization tools such as a geometry viewer, \na contact map and a reactivity network graph.\n\n## BluePySubcellular\n\nUseful links:\n[GitHub repo](https://github.com/BlueBrain/Bluepysubcellular),\n[Documentation](https://github.com/BlueBrain/BluePySubcellular#readme).\n\n**A Python interface to BlueNaaS-Subcellular.**\n\nBluePySubcellular is a python interface to BlueNaas-Subcellular, \nit allows users to define models of reaction-diffusion networks and geometries using tetrahedral meshes. \nIt also enables users to run simulations in the cloud and download the results for further analysis\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbluebrain%2Fsubcellular-suite","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fbluebrain%2Fsubcellular-suite","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fbluebrain%2Fsubcellular-suite/lists"}