{"id":23673830,"url":"https://github.com/carpentries-incubator/topological-data-analysis","last_synced_at":"2025-07-23T06:35:20.308Z","repository":{"id":217386290,"uuid":"743653244","full_name":"carpentries-incubator/topological-data-analysis","owner":"carpentries-incubator","description":"Topological data analysis for Comparative Genomics ","archived":false,"fork":false,"pushed_at":"2025-04-30T05:24:43.000Z","size":10833,"stargazers_count":2,"open_issues_count":1,"forks_count":3,"subscribers_count":5,"default_branch":"gh-pages","last_synced_at":"2025-06-13T05:04:59.504Z","etag":null,"topics":["carpentries-incubator","comparative-genomics","english","lesson","pangenomics","pre-alpha","python"],"latest_commit_sha":null,"homepage":"https://carpentries-incubator.github.io/topological-data-analysis/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/carpentries-incubator.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE.md","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":"AUTHORS","dei":null,"publiccode":null,"codemeta":null,"zenodo":null},"funding":{"github":["carpentries"],"custom":["https://give.communityin.org/TheCarpentries"]}},"created_at":"2024-01-15T17:39:23.000Z","updated_at":"2025-04-30T05:24:47.000Z","dependencies_parsed_at":"2025-04-25T20:38:53.630Z","dependency_job_id":null,"html_url":"https://github.com/carpentries-incubator/topological-data-analysis","commit_stats":null,"previous_names":["paumayell/topological-data-analysis","carpentries-incubator/topological-data-analysis"],"tags_count":0,"template":false,"template_full_name":"carpentries-incubator/template","purl":"pkg:github/carpentries-incubator/topological-data-analysis","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Ftopological-data-analysis","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Ftopological-data-analysis/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Ftopological-data-analysis/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Ftopological-data-analysis/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/carpentries-incubator","download_url":"https://codeload.github.com/carpentries-incubator/topological-data-analysis/tar.gz/refs/heads/gh-pages","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Ftopological-data-analysis/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":266631554,"owners_count":23959420,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-07-23T02:00:09.312Z","response_time":66,"last_error":null,"robots_txt_status":null,"robots_txt_updated_at":null,"robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["carpentries-incubator","comparative-genomics","english","lesson","pangenomics","pre-alpha","python"],"created_at":"2024-12-29T12:56:40.088Z","updated_at":"2025-07-23T06:35:20.281Z","avatar_url":"https://github.com/carpentries-incubator.png","language":"Python","funding_links":["https://github.com/sponsors/carpentries","https://give.communityin.org/TheCarpentries"],"categories":[],"sub_categories":[],"readme":"# FIXME Lesson title\n\n[![Create a Slack Account with us](https://img.shields.io/badge/Create_Slack_Account-The_Carpentries-071159.svg)](https://swc-slack-invite.herokuapp.com/)\n\n**Thanks for contributing to The Carpentries Incubator!**\nThis repository provides a blank starting point for lessons to be developed here.\n\nA member of the [Carpentries Curriculum Team](https://carpentries.org/team/)\nwill work with you to get your lesson listed on the\n[Community Developed Lessons page][community-lessons]\nand make sure you have everything you need to begin developing your new lesson.\n\n## What to do next\n\nBefore you begin developing your new lesson,\nhere are a few things we recommend you do:\n\n* [ ] Decide on a title for your new lesson!\n  Once you've chosen a new title, you can set the value for `lesson_title`\n  in [`_config.yml`](_config.yml)\n* [ ] Add the URL to your built lesson pages to the repository description\\*\n* [ ] [Add relevant topic tags to your lesson repository][cdh-topic-tags].\n* [ ] Fill in the fields marked `FIXME` in:\n  * this README\n  * [`_config.yml`](_config.yml)\n* [ ] If you're going to be developing lesson material for the first time\n  according to our design principles,\n  consider reading the [Carpentries Curriculum Development Handbook][cdh]\n* [ ] Consult the [Lesson Example][lesson-example] website to find out more about\n  working with the lesson template\n* [ ] If you are planning to write your lesson in RMarkdown,\n  [create a `main` branch and set this as the default branch in your repository settings][change-default-branch]\n* [ ] Update this README with relevant information about your lesson\n  and delete this section\n\n\n\\* To set the URL on GitHub, click the gear wheel button next to **About**\non the right of the repository landing page.\nThe lesson URL structure is **https://carpentries-incubator.github.io/\u003crepository-slug\\\u003e**:\na repository at https://github.com/carpentries-incubator/new-lesson/ will have pages at\nthe lesson URL https://carpentries-incubator.github.io/new-lesson/.\n\n\n## Contributing\n\nWe welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any\nquestions, concerns, or experience any difficulties along the way.\n\nWe'd like to ask you to familiarize yourself with our [Contribution Guide](CONTRIBUTING.md) and have a look at\nthe [more detailed guidelines][lesson-example] on proper formatting, ways to render the lesson locally, and even\nhow to write new episodes.\n\nPlease see the current list of [issues][FIXME] for ideas for contributing to this\nrepository. For making your contribution, we use the GitHub flow, which is\nnicely explained in the chapter [Contributing to a Project](http://git-scm.com/book/en/v2/GitHub-Contributing-to-a-Project) in Pro Git\nby Scott Chacon.\nLook for the tag ![good_first_issue](https://img.shields.io/badge/-good%20first%20issue-gold.svg). This indicates that the maintainers will welcome a pull request fixing this issue.\n\n\n## Maintainer(s)\n\nCurrent maintainers of this lesson are\n\n* FIXME\n* FIXME\n* FIXME\n\n\n## Authors\n\nA list of contributors to the lesson can be found in [AUTHORS](AUTHORS)\n\n## Citation\n\nTo cite this lesson, please consult with [CITATION](CITATION)\n\n[cdh]: https://cdh.carpentries.org\n[cdh-topic-tags]: https://cdh.carpentries.org/the-carpentries-incubator.html#topic-tags\n[change-default-branch]: https://docs.github.com/en/github/administering-a-repository/changing-the-default-branch\n[community-lessons]: https://carpentries.org/community-lessons\n[lesson-example]: https://carpentries.github.io/lesson-example\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fcarpentries-incubator%2Ftopological-data-analysis","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fcarpentries-incubator%2Ftopological-data-analysis","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fcarpentries-incubator%2Ftopological-data-analysis/lists"}