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unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["brain-dynamics-modeling","brainpy"],"created_at":"2025-12-25T16:49:38.669Z","updated_at":"2026-04-10T10:02:56.152Z","avatar_url":"https://github.com/chaobrain.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Modeling tools for brain simulation\n\n\u003cp align=\"center\"\u003e\n  \u003cimg alt=\"Header image of braintools.\" src=\"https://raw.githubusercontent.com/chaobrain/braintools/main/docs/_static/braintools.png\" width=50%\u003e\n\u003c/p\u003e\n\n\u003cp align=\"center\"\u003e\n  \u003ca href=\"https://pypi.org/project/braintools/\"\u003e\u003cimg alt=\"Supported Python Version\" src=\"https://img.shields.io/pypi/pyversions/braintools\"\u003e\u003c/a\u003e\n  \u003ca href=\"https://github.com/chaobrain/braintools/blob/main/LICENSE\"\u003e\u003cimg alt=\"LICENSE\" src=\"https://img.shields.io/badge/License-Apache%202.0-blue.svg\"\u003e\u003c/a\u003e\n  \u003ca href='https://braintools.readthedocs.io/?badge=latest'\u003e\n    \u003cimg src='https://readthedocs.org/projects/braintools/badge/?version=latest' alt='Documentation Status' /\u003e\n  \u003c/a\u003e\n  \u003ca href=\"https://badge.fury.io/py/braintools\"\u003e\u003cimg alt=\"PyPI version\" src=\"https://badge.fury.io/py/braintools.svg\"\u003e\u003c/a\u003e\n  \u003ca href=\"https://github.com/chaobrain/braintools/actions/workflows/CI.yml\"\u003e\u003cimg alt=\"Continuous Integration\" src=\"https://github.com/chaobrain/braintools/actions/workflows/CI.yml/badge.svg\"\u003e\u003c/a\u003e\n  \u003ca href=\"https://doi.org/10.5281/zenodo.17110064\"\u003e\u003cimg src=\"https://zenodo.org/badge/776629792.svg\" alt=\"DOI\"\u003e\u003c/a\u003e\n\u003c/p\u003e\n\n`braintools` is a lightweight, JAX-friendly toolbox with practical utilities for brain modeling.\n\n## Highlights\n\n- **Composable connectivity**: declarative builders for point, multi-compartment, and population networks with spatial kernels, degree constraints, and unit-aware metadata\n- **Visualization suite**: publication plots, interactive dashboards, 3D viewers, and animation helpers in `braintools.visualize`\n- **Metrics and solvers**: losses, evaluation metrics, and PyTree-aware ODE/SDE/DDE integrators ready for `jit`/`vmap`\n- **Signal and optimization helpers**: reusable generators and lightweight optimizers to prototype models quickly\n\n`braintools` integrates smoothly with the broader ecosystem (e.g., `brainstate`, `brainunit`) while keeping a simple, functional style.\n\n## Installation\n\n```bash\npip install -U braintools\n```\n\nOptional extras are published for hardware-specific builds:\n\n```bash\npip install -U braintools[cpu]\n# CUDA 12.x wheels\npip install -U braintools[cuda12]\n# TPU runtime\npip install -U braintools[tpu]\n```\n\nAlternatively, install the curated BrainX bundle that ships with `braintools` and related projects:\n\n```bash\npip install -U BrainX\n```\n\n## Documentation\n\nThe full documentation is available at https://braintools.readthedocs.io\n\n## Ecosystem\n\n`braintools` is one part of our brain simulation ecosystem: https://brainmodeling.readthedocs.io/\n\n## Contributing\n\nContributions and issue reports are welcome! See `CONTRIBUTING.md` for guidelines.\n\n## License\n\nApache 2.0. See `LICENSE` for details.\n\n## Citation\n\nIf you use `braintools` in your work, please cite the Zenodo DOI: [10.5281/zenodo.17110064](https://doi.org/10.5281/zenodo.17110064)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fchaobrain%2Fbraintools","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fchaobrain%2Fbraintools","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fchaobrain%2Fbraintools/lists"}