{"id":23646753,"url":"https://github.com/cnpem/pymol4win","last_synced_at":"2025-09-09T22:15:04.632Z","repository":{"id":224946544,"uuid":"613586628","full_name":"cnpem/PyMOL4Win","owner":"cnpem","description":"Open Source PyMOL for Windows","archived":false,"fork":false,"pushed_at":"2024-05-21T16:56:45.000Z","size":24244,"stargazers_count":7,"open_issues_count":0,"forks_count":1,"subscribers_count":1,"default_branch":"main","last_synced_at":"2024-12-28T13:39:25.795Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/cnpem.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2023-03-13T21:35:31.000Z","updated_at":"2024-12-19T22:33:48.000Z","dependencies_parsed_at":"2024-03-12T15:45:20.903Z","dependency_job_id":null,"html_url":"https://github.com/cnpem/PyMOL4Win","commit_stats":null,"previous_names":["lbc-lnbio/pymol4win"],"tags_count":2,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cnpem%2FPyMOL4Win","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cnpem%2FPyMOL4Win/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cnpem%2FPyMOL4Win/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cnpem%2FPyMOL4Win/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cnpem","download_url":"https://codeload.github.com/cnpem/PyMOL4Win/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":239595425,"owners_count":19665341,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-12-28T13:39:34.109Z","updated_at":"2025-02-19T04:26:36.025Z","avatar_url":"https://github.com/cnpem.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# Open Source PyMOL for Windows\n\nOpen source PyMOL is available free of charge. A pre-compiled open source PyMOL is available free from [Christoph Gohlke](https://www.cgohlke.com/) of the Department of Biomedical Engineering, University of California, Irvine.\n\nThis repository provides a method to install PyMOL v2.6 on Windows. If necessary, a portuguese version of this guide is available [here](https://github.com/cnpem/PyMOL4Win/blob/main/README_PT.md).\n\n## Download \u0026 Installation\n\nFollow these steps to install PyMOL v2.6:\n\n1. Install the latest version of Python (v3.12.x) for Windows from [here](http://www.python.org/downloads/).\n\n_Note_: Make sure the option to add environment variables is selected or add the folder of python.exe to system PATH.\n\n2. Install required Python packages\n\n```cmd\npython -m pip install numpy\npython -m pip install pmw\npython -m pip install pyqt5\n```\n\n3. Download pre-compiled Open-Source PyMOL wheel files, compatible with Python 3.12 and Windows 64-bit, from the links below:\n\n- [pymol-launcher](https://github.com/cnpem/PyMOL4Win/releases/latest/download/pymol_launcher-2.6-cp312-cp312-win_amd64.whl)\n- [pymol](https://github.com/cnpem/PyMOL4Win/releases/latest/download/pymol-2.6.0a0-cp312-cp312-win_amd64.whl)\n\n_Note_: You can check Python version on anaconda by typing `python --version`.\n\nIf you are using a different Python version or Windows 32-bits, please there are other pre-compiled versions [here](https://github.com/cgohlke/pymol-open-source-wheels/releases).\n\nThe filename structure is the following:\n\n```cmd\npymol‑2.6.0a0‑cp312‑cp312‑win_amd64.whl\n         \\         \\          \\\n          \\         \\          \\___ for 64 bit Windows\n           \\         \\\n            \\         \\____________ for Python 3.12.x\n             \\\n              \\____________________ PyMOL version 2.6.0a0\n```\n\n4. Install wheel files\n\nIn the CMD window (not PowerShell!), switch to download directory (`C:\\Users\\\u003cYour Username\u003e\\Downloads`):\n\n```cmd\ncd Downloads\n```\n\nThen, install `pymol_launcher-2.6-cp312-cp312-win_amd64.whl` by typing:\n\n```cmd\npython -m pip install --no-index --find-links=\"%CD%\" pymol_launcher-2.6-cp312-cp312-win_amd64.whl\n```\n\nFinally, to install `pymol-2.6.0a0-cp312-cp312-win_amd64.whl`, run:\n\n```cmd\npython -m pip install --upgrade --no-deps pymol-2.6.0a0-cp312-cp312-win_amd64.whl\n```\n\n_Note_: If you downloaded different files in **Step 4**, replace `pymol_launcher-2.6-cp312-cp312-win_amd64.whl` and `pymol-2.6.0a0-cp312-cp312-win_amd64.whl` by the downloaded wheel files.\n\n5. Launch PyMOL v2.6\n\nIn the CMD window (not PowerShell!), run:\n\n```cmd\nwhere.exe pymol\npymol\n```\n\nThen, PyMOL v2.6 will be launched and ready to go.\n\n6. (Optional) Create a shortcut to PyMOL\n\n```cmd\nwhere.exe pymol\n```\n\nThe location of `pymol.exe` will be displayed. Navigate to the file location, right-click on `PyMOL.exe`, and copy it to your Desktop.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fcnpem%2Fpymol4win","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fcnpem%2Fpymol4win","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fcnpem%2Fpymol4win/lists"}