{"id":16749044,"url":"https://github.com/cthoyt/rorio","last_synced_at":"2025-04-05T06:41:35.374Z","repository":{"id":77808516,"uuid":"588685718","full_name":"cthoyt/rorio","owner":"cthoyt","description":"Convert the Research Organization Registry (ROR) into an OWL instance ontology","archived":false,"fork":false,"pushed_at":"2024-04-24T10:40:12.000Z","size":102960,"stargazers_count":2,"open_issues_count":1,"forks_count":0,"subscribers_count":3,"default_branch":"main","last_synced_at":"2025-02-10T14:23:22.877Z","etag":null,"topics":["bibliometrics","ror","scientometrics"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"cc0-1.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/cthoyt.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null}},"created_at":"2023-01-13T18:27:50.000Z","updated_at":"2024-01-13T09:33:43.000Z","dependencies_parsed_at":"2023-11-20T14:55:33.116Z","dependency_job_id":null,"html_url":"https://github.com/cthoyt/rorio","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cthoyt%2Frorio","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cthoyt%2Frorio/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cthoyt%2Frorio/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cthoyt%2Frorio/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cthoyt","download_url":"https://codeload.github.com/cthoyt/rorio/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":247299788,"owners_count":20916185,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["bibliometrics","ror","scientometrics"],"created_at":"2024-10-13T02:23:42.618Z","updated_at":"2025-04-05T06:41:35.354Z","avatar_url":"https://github.com/cthoyt.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# ROR in OWL\n\nSimilar to the [ORCIDIO](https://github.com/cthoyt/orcidio), which makes an ontology of instances of researchers via\nORCID, this repository houses a script to convert the [Research Organization Registry (ROR)](https://ror.org) into\nan ontology of instances of organizations.\n\nThe latest version can be downloaded with the following:\n\n| Format         | PURL                              |\n|----------------|-----------------------------------|\n| OWL RDF/XML    | https://w3id.org/rorio/rorio.owl  |\n| OBO Flat File  | https://w3id.org/rorio/rorio.obo  |\n| OBO Graph JSON | https://w3id.org/rorio/rorio.json |\n\n\n![](img/rorio-in-protege.png)\n\nIn the screenshot, you can see the `part of`, `has part`, and `located in` relations for the example organization. Unfortunately, Protégé does not have support for navigating partonomies on individuals.\n\n## Build\n\nInstall the requirements and run with:\n\n```shell\npython -m pip install -r requirements.txt\npython build.py\n```\n\n## Named Entity Recognition\n\nA [Gilda](https://github.com/gyorilab/gilda) index is generated for usage in named entity recognition (NER)\nand named entity normalization (NEN; i.e., grounding). It is available at https://w3id.org/rorio/rorio.gilda.tsv.gz.\nIt can be used like in:\n\n```python\nfrom urllib.request import urlretrieve\nfrom gilda import Grounder\n\nurl = \"https://w3id.org/rorio/rorio.gilda.tsv.gz\"\npath = \"rorio.gilda.tsv.gz\"\nurlretrieve(url, path)\n\ngrounder = Grounder(path)\nscored_matches = grounder.ground(\"Rheinische Friedrich-Wilhelms-Universität Bonn\")\n```\n\n## License\n\nThe data downloaded from https://doi.org/10.5281/zenodo.6347574 are licensed under CC0. So is this repo. This is\nadditionally self-documented in the ontology files.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fcthoyt%2Frorio","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fcthoyt%2Frorio","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fcthoyt%2Frorio/lists"}