{"id":19634422,"url":"https://github.com/dataprofessor/bioactivity-prediction-app","last_synced_at":"2025-04-28T07:31:31.776Z","repository":{"id":48935277,"uuid":"340932599","full_name":"dataprofessor/bioactivity-prediction-app","owner":"dataprofessor","description":null,"archived":false,"fork":false,"pushed_at":"2021-09-22T05:55:05.000Z","size":20857,"stargazers_count":89,"open_issues_count":4,"forks_count":79,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-04-05T07:33:13.663Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/dataprofessor.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2021-02-21T15:20:42.000Z","updated_at":"2025-03-16T16:34:36.000Z","dependencies_parsed_at":"2022-09-08T12:11:16.109Z","dependency_job_id":null,"html_url":"https://github.com/dataprofessor/bioactivity-prediction-app","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dataprofessor%2Fbioactivity-prediction-app","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dataprofessor%2Fbioactivity-prediction-app/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dataprofessor%2Fbioactivity-prediction-app/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dataprofessor%2Fbioactivity-prediction-app/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/dataprofessor","download_url":"https://codeload.github.com/dataprofessor/bioactivity-prediction-app/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":251271177,"owners_count":21562502,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-11T12:21:13.258Z","updated_at":"2025-04-28T07:31:26.767Z","avatar_url":"https://github.com/dataprofessor.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# bioactivity-prediction-app\n\n# Watch the tutorial video\n\n[Bioinformatics Project from Scratch - Drug Discovery #6 (Deploy Model as Web App) | Streamlit #22](https://youtu.be/htBIP17S-20)\n\n\u003ca href=\"https://youtu.be/m0sePkuyTKs\"\u003e\u003cimg src=\"http://img.youtube.com/vi/m0sePkuyTKs/0.jpg\" alt=\"Bioinformatics Project from Scratch - Drug Discovery #6 (Deploy Model as Web App) | Streamlit #22\" title=\"Bioinformatics Project from Scratch - Drug Discovery #6 (Deploy Model as Web App) | Streamlit #22\" width=\"400\" /\u003e\u003c/a\u003e\n\n# Reproducing this web app\nTo recreate this web app on your own computer, do the following.\n\n### Create conda environment\nFirstly, we will create a conda environment called *bioactivity*\n```\nconda create -n bioactivity python=3.7.9\n```\nSecondly, we will login to the *bioactivity* environement\n```\nconda activate bioactivity\n```\n### Install prerequisite libraries\n\nDownload requirements.txt file\n\n```\nwget https://raw.githubusercontent.com/dataprofessor/bioactivity-prediction-app/main/requirements.txt\n\n```\n\nPip install libraries\n```\npip install -r requirements.txt\n```\n\n###  Download and unzip contents from GitHub repo\n\nDownload and unzip contents from https://github.com/dataprofessor/bioactivity-prediction-app/archive/main.zip\n\n### Generating the PKL file\n\nThe machine learning model used in this web app will firstly have to be generated by successfully running the included Jupyter notebook [bioactivity_prediction_app.ipynb](https://github.com/dataprofessor/bioactivity-prediction-app/blob/main/bioactivity_prediction_app.ipynb). Upon successfully running all code cells, a pickled model called acetylcholinesterase_model.pkl will be generated.\n\n###  Launch the app\n\n```\nstreamlit run app.py\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdataprofessor%2Fbioactivity-prediction-app","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fdataprofessor%2Fbioactivity-prediction-app","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdataprofessor%2Fbioactivity-prediction-app/lists"}