{"id":28716141,"url":"https://github.com/deepbiolab/plm-zero-to-hero","last_synced_at":"2025-06-15T02:39:31.341Z","repository":{"id":65809470,"uuid":"600370243","full_name":"deepbiolab/plm-zero-to-hero","owner":"deepbiolab","description":null,"archived":false,"fork":false,"pushed_at":"2025-05-24T15:02:15.000Z","size":4701,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-05-24T16:26:43.694Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/deepbiolab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2023-02-11T09:26:14.000Z","updated_at":"2025-05-24T15:02:18.000Z","dependencies_parsed_at":"2025-05-24T16:24:19.998Z","dependency_job_id":null,"html_url":"https://github.com/deepbiolab/plm-zero-to-hero","commit_stats":null,"previous_names":["deepbiolab/nn-zero-to-hero-in-science"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/deepbiolab/plm-zero-to-hero","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/deepbiolab%2Fplm-zero-to-hero","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/deepbiolab%2Fplm-zero-to-hero/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/deepbiolab%2Fplm-zero-to-hero/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/deepbiolab%2Fplm-zero-to-hero/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/deepbiolab","download_url":"https://codeload.github.com/deepbiolab/plm-zero-to-hero/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/deepbiolab%2Fplm-zero-to-hero/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":259914043,"owners_count":22931295,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2025-06-15T02:39:29.127Z","updated_at":"2025-06-15T02:39:31.329Z","avatar_url":"https://github.com/deepbiolab.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Protein Language Modeling from Zero to Hero\n\nThis repository is a hands-on, step-by-step tutorial series inspired by Andrej Karpathy’s \"nn zero to hero\" philosophy, tailored for the protein language modeling domain.\n\n## 🚀 What is this project?\n\nThis project walks you through building protein language models from scratch — starting from the simplest bigram model, all the way to advanced transformer architectures.  \nAlong the way, you’ll learn how to apply reinforcement learning (RL) techniques to fine-tune these models for protein-specific tasks.\n\n## 📖 Stay Tuned!\n\nThis series is under active development.  \nFollow the repository, and join the journey from zero to hero in protein language modeling!\n\n\n*Inspired by Andrej Karpathy. Bridging AI and biology, one model at a time.*","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdeepbiolab%2Fplm-zero-to-hero","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fdeepbiolab%2Fplm-zero-to-hero","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdeepbiolab%2Fplm-zero-to-hero/lists"}