{"id":16275751,"url":"https://github.com/dicook/rladies_highd_vis","last_synced_at":"2026-01-20T05:35:29.157Z","repository":{"id":145753434,"uuid":"208678254","full_name":"dicook/RLadies_highd_vis","owner":"dicook","description":"This is a revision of the useR! 2019 tutorial materials (https://github.com/dicook/useR2019_highd_vis) for R Ladies Canberra hosted by CSIRO Data61","archived":false,"fork":false,"pushed_at":"2019-09-19T02:08:42.000Z","size":618,"stargazers_count":1,"open_issues_count":0,"forks_count":1,"subscribers_count":2,"default_branch":"master","last_synced_at":"2025-10-13T01:59:09.324Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/dicook.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2019-09-16T00:37:45.000Z","updated_at":"2022-03-18T18:59:33.000Z","dependencies_parsed_at":null,"dependency_job_id":"612c8c76-ebea-43dd-ba56-9346c041be09","html_url":"https://github.com/dicook/RLadies_highd_vis","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/dicook/RLadies_highd_vis","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dicook%2FRLadies_highd_vis","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dicook%2FRLadies_highd_vis/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dicook%2FRLadies_highd_vis/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dicook%2FRLadies_highd_vis/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/dicook","download_url":"https://codeload.github.com/dicook/RLadies_highd_vis/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dicook%2FRLadies_highd_vis/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":28596497,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-01-20T02:08:49.799Z","status":"ssl_error","status_checked_at":"2026-01-20T02:08:44.148Z","response_time":117,"last_error":"SSL_read: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-10-10T18:36:14.261Z","updated_at":"2026-01-20T05:35:29.142Z","avatar_url":"https://github.com/dicook.png","language":null,"funding_links":[],"categories":[],"sub_categories":[],"readme":"# RLadies Canberra 2019 tutorial on high-dimensional data visualisation\n\nThe address for this repo is https://github.com/dicook/RLadies_highd_vis. \n\nThe workshop is interactive, bring your laptop set up with the **latest versions of R (\u003e3.5) and RStudio**, and these R packages:\n\n```\ninstall.packages(c(\"knitr\", \"tidyverse\", \"here\", \"nullabor\", \"forecast\", \"readxl\", \"GGally\", \"broom\", \"plotly\", \"tourr\", \"spinifex\", \"geozoo\", \"mvtnorm\", \"randomForest\", \"RColorBrewer\", \"mapproj\", \"superheat\", \"naniar\", \"gganimate\"))\n```\n\nAlso install:\n\n```\nremotes::install_github(\"wmurphyrd/fiftystater\")\n# remotes::install_github(\"sa-lee/sneezy\") # not necessary for the workshop\n```\n\nIf you have signed up for this tutorial it will be helpful to **download a copy of these materials ahead of time**, by downloading the `tutorial_highd_vis.zip` file above. Unzip the file into a project folder, to work through during the tutorial. It contains these files:\n\n- `data/TB_notifications_2019-07-01.csv`\n- `data/tb_burden.rda`\n- `data/TB_data_dictionary_2019-07-01.csv`\n- `data/IncRate.xlsx`\n- `tutorial_highd_vis.Rproj`\n- `tutorial_highd_vis.R`\n\n**Please have these on your computer ahead of the tutorial.**\n\nThis is the planned structure for the tutorial:\n\nA. Review basic visualisation and inference with graphics: This part\ncovers making plots using the grammar of graphics and how this fits\ninto statistical inference. We will use the packages ggplot2 and\nnullabor. \n\nB. Plotting multiple dimensions in a single static plot, adding\ninteraction: The building blocks to viewing high-dimensions are\ngeneralised pairs plots and parallel coordinate plots, available in\nthe R package GGally. There are many variations and options that will\nbe discussed, along with making these interactive with the plotly package.\n\nC. Using dynamic plots (tours) to examine models in the data space,\nbeyond 3D: This part will cover the use of tours to examine\nmultivariate spaces, in relation to dimension reduction techniques\nlike principal component analysis and t-SNE, supervised and\nunsupervised classification models. We will also examine\nhigh-dimension, low-sample size problems. The tourr and spinifex\npackages will be used. \n\nMaterials are designed for an intermediate audience, users who are familiar\nwith R, basic visualisation and tidyverse tools, and who would like to\nimprove their knowledge about data visualisation. \n\nThis is a revision of the useR! 2019 tutorial materials\n(https://github.com/dicook/useR2019_highd_vis) for R Ladies Canberra\nhosted by CSIRO Data61.\n\nYou can also work through the (useR! 2019) interactive tutorial at your own pace by\npointing your browser to:\n- https://ebsmonash.shinyapps.io/tutorial_highd_vis_part1/\n- https://ebsmonash.shinyapps.io/tutorial_highd_vis_part2/\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdicook%2Frladies_highd_vis","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fdicook%2Frladies_highd_vis","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdicook%2Frladies_highd_vis/lists"}