{"id":21441767,"url":"https://github.com/dmis-lab/bio-entity-extractor","last_synced_at":"2025-07-26T06:08:54.565Z","repository":{"id":97388604,"uuid":"159096430","full_name":"dmis-lab/bio-entity-extractor","owner":"dmis-lab","description":null,"archived":false,"fork":false,"pushed_at":"2018-12-10T16:39:07.000Z","size":20846,"stargazers_count":2,"open_issues_count":0,"forks_count":2,"subscribers_count":2,"default_branch":"master","last_synced_at":"2025-03-17T00:43:17.845Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://best.korea.ac.kr","language":"Java","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-2-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/dmis-lab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2018-11-26T02:08:12.000Z","updated_at":"2022-06-01T15:06:35.000Z","dependencies_parsed_at":"2024-03-14T05:15:49.838Z","dependency_job_id":null,"html_url":"https://github.com/dmis-lab/bio-entity-extractor","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/dmis-lab/bio-entity-extractor","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dmis-lab%2Fbio-entity-extractor","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dmis-lab%2Fbio-entity-extractor/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dmis-lab%2Fbio-entity-extractor/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dmis-lab%2Fbio-entity-extractor/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/dmis-lab","download_url":"https://codeload.github.com/dmis-lab/bio-entity-extractor/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dmis-lab%2Fbio-entity-extractor/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":267127832,"owners_count":24040142,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-07-26T02:00:08.937Z","response_time":62,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-23T01:42:13.164Z","updated_at":"2025-07-26T06:08:54.546Z","avatar_url":"https://github.com/dmis-lab.png","language":"Java","funding_links":[],"categories":[],"sub_categories":[],"readme":"# bio-entity-extractor\nA biomedical entity extractor used by \nLee S, Kim D, Lee K, Choi J, Kim S, Jeon M, et al. (2016) BEST: Next-Generation Biomedical Entity Search Tool for Knowledge Discovery from Biomedical Literature. PLoS ONE 11(10): e0164680. https://doi.org/10.1371/journal.pone.0164680\n \nGitHub version of http://infos.korea.ac.kr/bioentityextractor/\n\n* Usage\n    * Modify src/main/java/BioEntityExtractTest.java to fit your purpose. \n* Contact\n    * donghyeon@korea.ac.kr\n* License\n    * BSD 2-Clause","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdmis-lab%2Fbio-entity-extractor","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fdmis-lab%2Fbio-entity-extractor","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdmis-lab%2Fbio-entity-extractor/lists"}