{"id":15969051,"url":"https://github.com/dylanwal/well_plate","last_synced_at":"2025-03-17T20:30:59.657Z","repository":{"id":40769651,"uuid":"484516394","full_name":"dylanwal/well_plate","owner":"dylanwal","description":"well plates","archived":false,"fork":false,"pushed_at":"2024-07-18T13:57:00.000Z","size":60,"stargazers_count":1,"open_issues_count":0,"forks_count":1,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-02-28T03:41:56.380Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/dylanwal.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2022-04-22T17:22:13.000Z","updated_at":"2024-07-18T13:57:03.000Z","dependencies_parsed_at":"2024-07-18T16:13:32.400Z","dependency_job_id":"48a9a5cd-697a-4c6a-bcc9-ca5741808f14","html_url":"https://github.com/dylanwal/well_plate","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dylanwal%2Fwell_plate","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dylanwal%2Fwell_plate/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dylanwal%2Fwell_plate/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dylanwal%2Fwell_plate/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/dylanwal","download_url":"https://codeload.github.com/dylanwal/well_plate/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":243878494,"owners_count":20362433,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-10-07T19:21:26.305Z","updated_at":"2025-03-17T20:30:59.083Z","avatar_url":"https://github.com/dylanwal.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Well Plate (well_plate)\n\n---\n---\n![PyPI](https://img.shields.io/pypi/v/well_plate)\n![downloads](https://static.pepy.tech/badge/well_plate)\n![license](https://img.shields.io/github/license/dylanwal/well_plate)\n\nMakes nice visualizations of well plates!\n\n\n---\n\n## Installation\n\n```\npip install well_plate\n```\n\n## Dependencies\n\n[numpy](https://github.com/numpy/numpy)\n\n[pandas](https://github.com/pandas-dev/pandas)\n\n[plotly](https://github.com/plotly/plotly.py)\n\n---\n---\n\n## Options\n\n* Well numbers\n  * 6\n  * 12\n  * 24\n  * 96\n  * 384\n  * To add more see [well_plate/config.py](https://github.com/dylanwal/well_plate/blob/master/well_plate/config.py)\n\n* Well shape\n  * 'circle'\n  * 'rect' (square)\n\n* Add data\n  * use `wp.add_data()`; pass in a pd.Series with the index corresponding to well plate index (eg. \"A1\", \"E4\", ...)\n\n---\n---\n\n## Example\n### Basic example\n```python\n    import well_plate\n\n    wp = well_plate.WellPlate(24)\n    wp.plot()\n```\n![well_plate](https://raw.githubusercontent.com/dylanwal/well_plate/master/examples/well_plate_24.svg)\n\n### Change well size\n```python\n    import well_plate\n\n    wp = well_plate.WellPlate(96, \"rect\")\n    wp.plot()\n```\n![well_plate](https://raw.githubusercontent.com/dylanwal/well_plate/master/examples/well_plate_96r.svg)\n\n# Add data\n\n```python\n    import pandas as pd    \n    import well_plate\n\n    wp = well_plate.WellPlate(384, \"rect\")\n    \n    df = pd.read_csv(\"example1_data.csv\", index_col=0)\n    wp.add_data(df[\"mw_n\"])\n    \n    wp.plot(key=\"mw_n\")\n    wp.heatmap(key=\"mw_n\")\n```\n![well_plate](https://raw.githubusercontent.com/dylanwal/well_plate/master/examples/well_plate_with_data.svg)\n![well_plate](https://raw.githubusercontent.com/dylanwal/well_plate/master/examples/heatmap.svg)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdylanwal%2Fwell_plate","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fdylanwal%2Fwell_plate","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fdylanwal%2Fwell_plate/lists"}