{"id":18380864,"url":"https://github.com/eeholmes/cov19","last_synced_at":"2026-02-01T01:06:18.667Z","repository":{"id":70476306,"uuid":"249264165","full_name":"eeholmes/CoV19","owner":"eeholmes","description":"Package for exploring the CoV-19 data","archived":false,"fork":false,"pushed_at":"2021-10-17T05:27:41.000Z","size":3144152,"stargazers_count":0,"open_issues_count":3,"forks_count":1,"subscribers_count":3,"default_branch":"master","last_synced_at":"2025-06-04T06:51:25.108Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://eeholmes.github.io/CoV19/","language":"HTML","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/eeholmes.png","metadata":{"files":{"readme":"README.Rmd","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2020-03-22T20:12:32.000Z","updated_at":"2021-10-17T05:27:44.000Z","dependencies_parsed_at":"2023-03-11T08:39:33.930Z","dependency_job_id":null,"html_url":"https://github.com/eeholmes/CoV19","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/eeholmes/CoV19","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eeholmes%2FCoV19","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eeholmes%2FCoV19/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eeholmes%2FCoV19/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eeholmes%2FCoV19/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/eeholmes","download_url":"https://codeload.github.com/eeholmes/CoV19/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eeholmes%2FCoV19/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":259503208,"owners_count":22867954,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-11-06T00:43:48.999Z","updated_at":"2026-02-01T01:06:13.645Z","avatar_url":"https://github.com/eeholmes.png","language":"HTML","funding_links":[],"categories":[],"sub_categories":[],"readme":"---\ntitle: \"CoV19\"\nauthor: Eli Holmes\noutput: github_document\n---\n\nThis is a package for exploring some of the CoV-19 data. The world data is downloaded from JHU. The US data is downloaded from JHU and CovidTracking. The Italy data is downloaded from the Italian CDC (Protezione Civile) \n\nSources:\n\n* https://github.com/CSSEGISandData/COVID-19\n* https://covidtracking.com/api/ \n* https://github.com/pcm-dpc/COVID-19\n\nTo install the package\n\n```\nlibrary(devtools)\ninstall_github(\"eeholmes/CoV19\")\n```\n\nTo get the data, type any of these on command line. After loading.\n```\nstates\nitaly\nworld\n```\nUse `head()` to look at it. Should be pretty self-evident what it is.\n\n# Functions\n\n* `regions()` will show you the regions in each data set. \n* `plot2()` a basic plot of total, hospitalized, and deaths. First argument is a data object (states, italy, world or subset of these) and second argument is a region (can be partial). Use ?plot2 to read the help page.\n\n# Plots\n\n```{r, message=FALSE, warning=FALSE}\nlibrary(CoV19)\nplot2(italy, \"Lomb\", decorate=TRUE)\n```\n\n```{r, message=FALSE, warning=FALSE}\nplot2(states, c(\"WA\",\"CA\"))\n```\n\n```{r, message=FALSE, warning=FALSE}\nplot2(states, c(\"NY\",\"NJ\",\"PA\",\"MA\"))\n```\n\nSomething is odd with the Hubei data in the JHU data set.\n\n```{r, message=FALSE, warning=FALSE}\nplot2(world, \"Hubei China\", decorate=TRUE)\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Feeholmes%2Fcov19","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Feeholmes%2Fcov19","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Feeholmes%2Fcov19/lists"}