{"id":16614517,"url":"https://github.com/elianhugh/openscithesis","last_synced_at":"2025-03-10T23:55:26.469Z","repository":{"id":112887869,"uuid":"294317963","full_name":"ElianHugh/OpenSciThesis","owner":"ElianHugh","description":"Cross-examining open science policies in journals, contrasting with perceived open science barriers in university","archived":false,"fork":false,"pushed_at":"2020-11-03T04:31:45.000Z","size":1092,"stargazers_count":1,"open_issues_count":0,"forks_count":1,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-01-17T16:37:19.682Z","etag":null,"topics":["openaccess","openscience","sherpa"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ElianHugh.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2020-09-10T06:03:08.000Z","updated_at":"2020-11-03T04:31:47.000Z","dependencies_parsed_at":null,"dependency_job_id":"89ba330b-e308-4b34-aad9-00ded579d1cb","html_url":"https://github.com/ElianHugh/OpenSciThesis","commit_stats":{"total_commits":41,"total_committers":2,"mean_commits":20.5,"dds":0.2195121951219512,"last_synced_commit":"80e97861d6c186868c799ea692b09767723e97b2"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ElianHugh%2FOpenSciThesis","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ElianHugh%2FOpenSciThesis/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ElianHugh%2FOpenSciThesis/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ElianHugh%2FOpenSciThesis/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ElianHugh","download_url":"https://codeload.github.com/ElianHugh/OpenSciThesis/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":242945845,"owners_count":20210762,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["openaccess","openscience","sherpa"],"created_at":"2024-10-12T02:06:35.266Z","updated_at":"2025-03-10T23:55:26.446Z","avatar_url":"https://github.com/ElianHugh.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"# OpenSciThesis\n\nTo run, source the [make.R file](make.R)\n\n### Code for my Honours thesis on open science practice\n\nThis repository contains the R code for my honours thesis analysis. It uses the [drake package](https://github.com/ropensci/drake) and Miles McBain's [dflow](https://github.com/MilesMcBain/dflow) for structuring the file base.\n\nPlease see [here](R/plan.R) for the drake code plan. Each file in the R folder is [used as a function](https://books.ropensci.org/drake/scripts.html#function-oriented-workflows) in the plan.\n\n### This code cannot be run on its own!\nAs I do not have ownership over the data used, the data/ folder is not part of this repository. If permission is given for the data to be uploaded, it will likely be uploaded to the [Open Science Framework](https://osf.io/cxus9/).\n\nThe data files that are missing are:\n\n- TOP factor data\n  - This can be obtained from: https://osf.io/qatkz/\n- Sherpa/ROMEO data\n  - This can be obtained from: https://v2.sherpa.ac.uk/romeo/\n  - I use an API call  in fetch_sherpa to obtain the journals for analysis. An api key is needed for this to work (see get_key).\n- Journal ranking data\n  - This can be obtained from Scopus: https://www.scopus.com/sources\n  - Have to export the first sheet of the xlsb as 'CiteScore.csv', as R cannot parse xlsb files well.\n\n- Survey data\n  - This cannot currently be obtained without permission. If uploaded, will be on the OSF.\n\n### Dependency Graph\n\n![dependency graph](plot.png)\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Felianhugh%2Fopenscithesis","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Felianhugh%2Fopenscithesis","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Felianhugh%2Fopenscithesis/lists"}