{"id":32200549,"url":"https://github.com/emdelponte/r4pde","last_synced_at":"2026-02-19T23:01:11.685Z","repository":{"id":130661186,"uuid":"589387289","full_name":"emdelponte/r4pde","owner":"emdelponte","description":"R package developed as a companion to the book \"R for Plant Disease Epidemiology\" (R4PDE).","archived":false,"fork":false,"pushed_at":"2026-02-14T23:03:26.000Z","size":11278,"stargazers_count":5,"open_issues_count":0,"forks_count":1,"subscribers_count":1,"default_branch":"main","last_synced_at":"2026-02-15T06:42:42.378Z","etag":null,"topics":["botanical-epidemiology","data-analysis","data-analysis-r","epidemics","r","rlang","rstats"],"latest_commit_sha":null,"homepage":"https://emdelponte.github.io/r4pde/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/emdelponte.png","metadata":{"files":{"readme":"README.md","changelog":"NEWS.md","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2023-01-16T01:20:25.000Z","updated_at":"2026-02-14T23:03:29.000Z","dependencies_parsed_at":"2023-10-11T01:56:46.136Z","dependency_job_id":"8f075989-d0c0-4226-8d51-7326adf8ba5e","html_url":"https://github.com/emdelponte/r4pde","commit_stats":{"total_commits":48,"total_committers":1,"mean_commits":48.0,"dds":0.0,"last_synced_commit":"c427e0e0d12c6cbb97a28a696b1782910f72f602"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/emdelponte/r4pde","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/emdelponte%2Fr4pde","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/emdelponte%2Fr4pde/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/emdelponte%2Fr4pde/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/emdelponte%2Fr4pde/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/emdelponte","download_url":"https://codeload.github.com/emdelponte/r4pde/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/emdelponte%2Fr4pde/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":29636035,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-02-19T22:32:43.237Z","status":"ssl_error","status_checked_at":"2026-02-19T22:32:38.330Z","response_time":117,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.6:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["botanical-epidemiology","data-analysis","data-analysis-r","epidemics","r","rlang","rstats"],"created_at":"2025-10-22T03:51:39.782Z","updated_at":"2026-02-19T23:01:11.660Z","avatar_url":"https://github.com/emdelponte.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"# r4pde \u003cimg src=\"man/figures/logo.png\" width=\"200px\" align=\"right\"/\u003e\n\n[![CRAN](https://www.r-pkg.org/badges/version/r4pde)](https://CRAN.R-project.org/package=r4pde) [![Downloads](https://cranlogs.r-pkg.org/badges/grand-total/r4pde)](https://CRAN.R-project.org/package=r4pde)\\\nAn R package developed as a companion to the book [R for Plant Disease Epidemiology](https://r4pde.netlify.app/). It provides access to a suite of specialized R functions and datasets tailored for teaching and analyzing plant disease epidemiology. This package supports researchers, students, and practitioners by offering tools for disease quantification, spatial analysis and predictive modeling.\n\n## Installation\n\nInstall the stable release from CRAN.\n\n``` r\ninstall.packages(\"r4pde\")\n```\n\nThe development version of {r4pde} is available from GitHub. To install it along with its dependencies (including Bioconductor packages), use the [`pak`](https://pak.r-lib.org/) package:\n\n``` r\nif (!requireNamespace(\"pak\", quietly = TRUE)) install.packages(\"pak\")\npak::pkg_install(\"emdelponte/r4pde\")\n```\n\nAlternatively, using remotes:\n\n``` r\nif (!requireNamespace(\"remotes\", quietly = TRUE)) install.packages(\"remotes\")\nremotes::install_github(\"emdelponte/r4pde\")\n```\n\n## Reporting Issues\n\nPlease [report any bugs or issues](https://github.com/emdelponte/r4pde/issues) via the GitHub issue tracker.\n\n## License and Citation\n\n-   This package is released under the MIT license.\n-   To cite the package, please use:\n\n``` r\ncitation(\"r4pde\")\n```\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Femdelponte%2Fr4pde","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Femdelponte%2Fr4pde","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Femdelponte%2Fr4pde/lists"}