{"id":23210134,"url":"https://github.com/ethanbass/zerenebatchr","last_synced_at":"2025-04-05T12:24:09.939Z","repository":{"id":107292924,"uuid":"546221162","full_name":"ethanbass/zerenebatchR","owner":"ethanbass","description":"Utility for batch processing images in Zerene Stacker","archived":false,"fork":false,"pushed_at":"2024-07-18T19:57:04.000Z","size":53,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-02-10T23:39:36.687Z","etag":null,"topics":["focus-stacking","r-package"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ethanbass.png","metadata":{"files":{"readme":"README.md","changelog":"NEWS.md","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2022-10-05T18:30:20.000Z","updated_at":"2024-03-13T05:38:12.000Z","dependencies_parsed_at":"2024-07-19T00:44:19.492Z","dependency_job_id":"64c4bd14-01f9-4bec-867f-cbb5930f39b5","html_url":"https://github.com/ethanbass/zerenebatchR","commit_stats":null,"previous_names":[],"tags_count":4,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ethanbass%2FzerenebatchR","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ethanbass%2FzerenebatchR/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ethanbass%2FzerenebatchR/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ethanbass%2FzerenebatchR/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ethanbass","download_url":"https://codeload.github.com/ethanbass/zerenebatchR/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":247334451,"owners_count":20922214,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["focus-stacking","r-package"],"created_at":"2024-12-18T18:32:08.192Z","updated_at":"2025-04-05T12:24:09.921Z","avatar_url":"https://github.com/ethanbass.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"# zerenebatchR\n\n\u003c!-- badges: start --\u003e\n  [![zerenebatchR status badge](https://ethanbass.r-universe.dev/badges/zerenebatchR)](https://ethanbass.r-universe.dev)\n  [![stability-experimental](https://img.shields.io/badge/stability-experimental-orange.svg)](https://github.com/emersion/stability-badges#experimental)\n\u003c!-- badges: end --\u003e\n\n## Overview\n\n`zerenebatchR` is an R utility for batch processing images in [Zerene Stacker](http://www.zerenesystems.com/cms/stacker). [Batch processing in Zerene Stacker](https://zerenesystems.com/cms/stacker/docs/howtouseit#batch_processing) requires you to already have the images you want to process organized into folders by stack. If you have many stacks, this can be an onerous task. `zerenebatchR` aims to simplify this process by automatically grouping images into folders using information supplied from a spreadsheet and creating the required batch file. **`zerenebatchR` is not created or endorsed by the developers of Zerene Stacker.**\n\n\n## Installation\n\nzerenebatchR can be installed from GitHub as follows:\n\n```\ninstall.packages(\"remote\")\nremotes::install_github(\"https://github.com/ethanbass/zerenebatchR/\")\n```\n\nOr install directly from my R Universe repo:\n\n```\ninstall.packages(\"zerenebatchR\", repos=\"https://ethanbass.r-universe.dev/\", type=\"source\")\n```\n\n## Usage\n\nThe function `expand_zs_batch` can be used to expand a `data.frame` containing the first and last file in a stack. This expanded `data.frame` can then be fed to the `run_zs_batch` function to stack images in Zerene Stacker. `zerenebatchR` automatically creates the folders of images that are required for batch image processing in Zerene Stacker and creates the batch script. For further details, please see the documentation by running `?zerenebatchR::run_zs_batch` or `?zerenebatchR::expand_zs_batch` from your R console.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fethanbass%2Fzerenebatchr","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fethanbass%2Fzerenebatchr","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fethanbass%2Fzerenebatchr/lists"}