{"id":23759018,"url":"https://github.com/eweitz/degenome","last_synced_at":"2025-07-03T11:03:33.203Z","repository":{"id":62567527,"uuid":"232309674","full_name":"eweitz/degenome","owner":"eweitz","description":"Differential expression across the genome","archived":false,"fork":false,"pushed_at":"2020-02-01T13:34:20.000Z","size":11881,"stargazers_count":2,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-06-01T13:02:57.907Z","etag":null,"topics":["differential-expression","pipeline"],"latest_commit_sha":null,"homepage":"https://degenome.readthedocs.io","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"cc0-1.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/eweitz.png","metadata":{"files":{"readme":"README.rst","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2020-01-07T11:24:30.000Z","updated_at":"2020-02-25T19:22:53.000Z","dependencies_parsed_at":"2022-11-03T16:30:43.850Z","dependency_job_id":null,"html_url":"https://github.com/eweitz/degenome","commit_stats":null,"previous_names":[],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/eweitz/degenome","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eweitz%2Fdegenome","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eweitz%2Fdegenome/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eweitz%2Fdegenome/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eweitz%2Fdegenome/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/eweitz","download_url":"https://codeload.github.com/eweitz/degenome/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/eweitz%2Fdegenome/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":261990350,"owners_count":23241190,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["differential-expression","pipeline"],"created_at":"2024-12-31T19:56:26.402Z","updated_at":"2025-07-03T11:03:33.183Z","avatar_url":"https://github.com/eweitz.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"DEGenome – Differential expression across the genome\n====================================================\n|Build| |Coverage| |PyPI|\n\nDEGenome transforms differential expression data into inputs for `exploratory genome analysis with Ideogram.js`_.\n\n`Read the docs`_, and try the `DEGenome tutorial on Terra\n\u003chttps://app.terra.bio/#workspaces/degenome/degenome/notebooks/launch/degenome-tutorial.ipynb\u003e`_!\n\n.. |Build| image:: https://img.shields.io/circleci/build/github/eweitz/degenome.svg\n  :target: https://circleci.com/gh/eweitz/degenome\n.. |Coverage| image:: https://codecov.io/gh/eweitz/degenome/branch/master/graph/badge.svg\n  :target: https://codecov.io/gh/eweitz/degenome\n.. |PyPI| image:: https://img.shields.io/pypi/v/degenome.svg\n  :target: https://pypi.org/project/degenome\n.. _Ideogram: https://github.com/eweitz/ideogram\n.. _Read the docs: https://degenome.readthedocs.io\n.. _exploratory genome analysis with Ideogram.js: https://eweitz.github.io/ideogram/differential-expression?annots-url=https://www.googleapis.com/storage/v1/b/degenome/o/GLDS-4_array_differential_expression_ideogram_annots.json\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Feweitz%2Fdegenome","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Feweitz%2Fdegenome","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Feweitz%2Fdegenome/lists"}