{"id":20027688,"url":"https://github.com/fabriziomusacchio/bio_image_registration","last_synced_at":"2025-07-13T13:38:50.383Z","repository":{"id":176633631,"uuid":"564298469","full_name":"FabrizioMusacchio/bio_image_registration","owner":"FabrizioMusacchio","description":"Scripts for evaluating common Python image registration methods","archived":false,"fork":false,"pushed_at":"2023-01-03T13:01:51.000Z","size":59463,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-01-12T17:25:21.598Z","etag":null,"topics":["histogram-matching","image-processing","image-registration","python"],"latest_commit_sha":null,"homepage":"https://www.fabriziomusacchio.com/blog/2023-01-02-image_registration/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/FabrizioMusacchio.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2022-11-10T12:20:36.000Z","updated_at":"2024-03-30T17:51:37.000Z","dependencies_parsed_at":null,"dependency_job_id":"3e06f898-1d66-4768-b3c5-dd4cd8069276","html_url":"https://github.com/FabrizioMusacchio/bio_image_registration","commit_stats":null,"previous_names":["fabriziomusacchio/bio_image_registration"],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FabrizioMusacchio%2Fbio_image_registration","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FabrizioMusacchio%2Fbio_image_registration/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FabrizioMusacchio%2Fbio_image_registration/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FabrizioMusacchio%2Fbio_image_registration/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/FabrizioMusacchio","download_url":"https://codeload.github.com/FabrizioMusacchio/bio_image_registration/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":241460045,"owners_count":19966516,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["histogram-matching","image-processing","image-registration","python"],"created_at":"2024-11-13T09:11:25.000Z","updated_at":"2025-03-02T04:43:22.914Z","avatar_url":"https://github.com/FabrizioMusacchio.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Bio-image registration with Python\n\nThe scripts in this repository were used to evaluate the performance of common bio-image registration methods with *Python*. The results of this study are summarized in this [blog post](https://www.fabriziomusacchio.com/blog/2023-01-02-image_registration/). The main evaluation routine is `imreg_tests.py`.\n\n![img](plots/jpg/imreg_thumb.jpg)\n\n## Phase correlation method\nDemonstration of the phase correlation method:\n![Demonstration of the phase correlation method.](plots/jpg/phase_cross_corr_figure.jpg)\n\n## optical flow methods\nDemonstration of an optical flow method:\n![Demonstration of an optical flow method.](plots/jpg/imreg_optical_flow.jpg)\n\n## Summary\nSummary of the results: Pearson correlation coefficients for the template image vs. the registered image for each tested transformation and algorithm:\n![Summary of our results: Pearson correlation coefficients for the template image vs. the registered image for each tested transformation and algorithm.](plots/jpg/imreg_summary.png)\n\n\u003cbr\u003e\n\nYou can find a detailed description of all applied tests and results in this [blog post](https://www.fabriziomusacchio.com/blog/2023-01-02-image_registration/).\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ffabriziomusacchio%2Fbio_image_registration","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ffabriziomusacchio%2Fbio_image_registration","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ffabriziomusacchio%2Fbio_image_registration/lists"}