{"id":22356644,"url":"https://github.com/finnishcancerregistry/directadjusting","last_synced_at":"2025-03-26T13:15:49.908Z","repository":{"id":174996141,"uuid":"203639108","full_name":"FinnishCancerRegistry/directadjusting","owner":"FinnishCancerRegistry","description":"Compute estimates of weighted averages with confidence intervals.","archived":false,"fork":false,"pushed_at":"2024-12-12T10:26:05.000Z","size":69,"stargazers_count":0,"open_issues_count":0,"forks_count":1,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-01-31T14:38:05.540Z","etag":null,"topics":["biostatistics","confidence-intervals","data-analysis","direct-adjusting","direct-adjustment","epidemiology","health-statistics","r","r-package","statistical-adjusting","statistical-adjustment","weighted-analysis","weighted-average","weighted-averages"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/FinnishCancerRegistry.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2019-08-21T18:08:25.000Z","updated_at":"2024-12-12T10:26:08.000Z","dependencies_parsed_at":null,"dependency_job_id":"482796ad-a38d-4590-a494-d19d13abe2ab","html_url":"https://github.com/FinnishCancerRegistry/directadjusting","commit_stats":null,"previous_names":["finnishcancerregistry/directadjusting","wetrobot/directadjusting"],"tags_count":1,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FinnishCancerRegistry%2Fdirectadjusting","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FinnishCancerRegistry%2Fdirectadjusting/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FinnishCancerRegistry%2Fdirectadjusting/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FinnishCancerRegistry%2Fdirectadjusting/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/FinnishCancerRegistry","download_url":"https://codeload.github.com/FinnishCancerRegistry/directadjusting/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":245659054,"owners_count":20651526,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["biostatistics","confidence-intervals","data-analysis","direct-adjusting","direct-adjustment","epidemiology","health-statistics","r","r-package","statistical-adjusting","statistical-adjustment","weighted-analysis","weighted-average","weighted-averages"],"created_at":"2024-12-04T14:11:32.878Z","updated_at":"2025-03-26T13:15:49.882Z","avatar_url":"https://github.com/FinnishCancerRegistry.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"\n\u003c!-- generated by R package codedoc; do not modify! --\u003e\n\n# Package `directadjusting`\n\n\nCompute estimates and confidence intervals of weighted averages quickly and easily.\n\n\u003c!-- badges: start --\u003e\n[![R-CMD-check](https://github.com/FinnishCancerRegistry/directadjusting/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/FinnishCancerRegistry/directadjusting/actions/workflows/R-CMD-check.yaml)\n\u003c!-- badges: end --\u003e\n\n# Recommended installation\n\n```r\ndevtools::install_github(\n  \"FinnishCancerRegistry/directadjusting\",\n  ref = readline(\"enter latest tag on github: \")\n)\n```\n\n# Example\n```r\nlibrary(\"directadjusting\")\n\n# suppose we have poisson rates that we want to adjust for by age group.\n# they are stratified by sex.\nlibrary(\"data.table\")\nset.seed(1337)\n\noffsets \u003c- rnorm(8, mean = 1000, sd = 100)\nbaseline \u003c- 100\nsex_hrs \u003c- rep(1:2, each = 4)\nage_group_hrs \u003c- rep(c(0.75, 0.90, 1.10, 1.25), times = 2)\ncounts \u003c- rpois(8, baseline * sex_hrs * age_group_hrs)\n\n# raw estimates\nmy_stats \u003c- data.table(\n  sex = rep(1:2, each = 4),\n  ag = rep(1:4, times = 2),\n  e = counts / offsets\n)\nmy_stats[[\"v\"]] \u003c- my_stats[[\"e\"]] / offsets\n\n# adjusted by age group\nmy_adj_stats \u003c- direct_adjusted_estimates(\n  stats_dt = my_stats,\n  stat_col_nms = \"e\",\n  var_col_nms = \"v\",\n  conf_lvls = 0.95,\n  conf_methods = \"log\",\n  stratum_col_nms = \"sex\",\n  adjust_col_nms = \"ag\",\n  weights = c(200, 300, 400, 100)\n)\n\n```\n\n\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ffinnishcancerregistry%2Fdirectadjusting","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ffinnishcancerregistry%2Fdirectadjusting","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ffinnishcancerregistry%2Fdirectadjusting/lists"}