{"id":13410802,"url":"https://github.com/fperdigon/BacillusMarker","last_synced_at":"2025-03-14T16:33:01.549Z","repository":{"id":131053763,"uuid":"92336798","full_name":"fperdigon/BacillusMarker","owner":"fperdigon","description":"BacillusMarker is an aplication to easy mark bacillus of tuberculose.","archived":false,"fork":false,"pushed_at":"2017-05-24T21:40:29.000Z","size":1134,"stargazers_count":2,"open_issues_count":0,"forks_count":2,"subscribers_count":3,"default_branch":"master","last_synced_at":"2024-07-31T20:44:00.375Z","etag":null,"topics":["labeling-tool","pyside","python","tuberculosis"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/fperdigon.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.TXT","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2017-05-24T21:08:27.000Z","updated_at":"2022-03-04T17:08:37.000Z","dependencies_parsed_at":"2023-04-11T17:17:09.971Z","dependency_job_id":null,"html_url":"https://github.com/fperdigon/BacillusMarker","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/fperdigon%2FBacillusMarker","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/fperdigon%2FBacillusMarker/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/fperdigon%2FBacillusMarker/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/fperdigon%2FBacillusMarker/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/fperdigon","download_url":"https://codeload.github.com/fperdigon/BacillusMarker/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":243610456,"owners_count":20318966,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["labeling-tool","pyside","python","tuberculosis"],"created_at":"2024-07-30T20:01:09.371Z","updated_at":"2025-03-14T16:33:01.517Z","avatar_url":"https://github.com/fperdigon.png","language":"Python","funding_links":[],"categories":["Open Scientific Research"],"sub_categories":["Scientific software"],"readme":"# BacillusMarker\n\n**BacillusMarker** is an aplication to easy mark bacillus of tuberculose.\n\u003cbr\u003e\u003cbr\u003eThe software was used to mark the bacillus of tuberculose in the TBImages database V2 http://www.tbimages.ufam.edu.br/ (UNRELEASED)\n\u003cbr\u003e\u003cbr\u003e email:\u003cFrancisco Perdigón Romero\u003e fperdigon88@gmail.com\n\n![BacillusMarker overview](BacillusMarker.png \"BacillusMarker overview\")\n\n#### Features\n\n- Annotation of bacilli, bacillus cluster and undefined items.\n- System of authentication and registry of annotations by users.\n- Full screen image.\n- Save annotations to CVS files (no need to generate a new image).\n- Save annotations to BMP files (new BMP image with marks).\n- Counting bacilli in a tail region. This option create a CSV file with the number of bacillus by image and total of bacillus in a tail region.\n\n#### Dependencies\n\n- Python2.7\n- PySide (any version for Qt4)\n- Qt4\n\n#### Operational System\n\n- Linux\n- Windows\n- MacOS\n\n\n#### Support\n\nUniversidade Federal do Amazonas, Brasil (UFAM).\n\u003cbr\u003ehttp://www.ufam.edu.br/\n\u003cbr\u003e\u003cbr\u003eCentro de Pesquisa e Desenvolvimento em Tecnologia Eletrônica e da Informação (CETELI).\n\u003cbr\u003ehttp://www.ceteli.ufam.edu.br/\n\u003cbr\u003e\u003cbr\u003eInstituto Nacional de Pesquisa da Amazonia (INPA).\n\u003cbr\u003ehttp://portal.inpa.gov.br/\n\n\n#### License\n\nMIT License\n\nCopyright (c) 2017 Francisco Perdigón Romero\n\nPermission is hereby granted, free of charge, to any person obtaining a copy\nof this software and associated documentation files (the \"Software\"), to deal\nin the Software without restriction, including without limitation the rights\nto use, copy, modify, merge, publish, distribute, sublicense, and/or sell\ncopies of the Software, and to permit persons to whom the Software is\nfurnished to do so, subject to the following conditions:\n\nThe above copyright notice and this permission notice shall be included in all\ncopies or substantial portions of the Software.\n\nTHE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\nIMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\nFITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE\nAUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\nLIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,\nOUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE\nSOFTWARE.","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ffperdigon%2FBacillusMarker","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Ffperdigon%2FBacillusMarker","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Ffperdigon%2FBacillusMarker/lists"}