{"id":23221515,"url":"https://github.com/g2bc/agua","last_synced_at":"2025-04-05T15:42:36.852Z","repository":{"id":216865258,"uuid":"725572923","full_name":"G2BC/agua","owner":"G2BC","description":null,"archived":false,"fork":false,"pushed_at":"2024-01-12T19:08:59.000Z","size":16234,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-02-11T12:34:12.084Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/G2BC.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2023-11-30T12:34:09.000Z","updated_at":"2023-12-10T06:57:40.000Z","dependencies_parsed_at":null,"dependency_job_id":"15a5abf0-2ee5-4a2a-9458-7e9ca92f6df0","html_url":"https://github.com/G2BC/agua","commit_stats":null,"previous_names":["g2bc/agua"],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/G2BC%2Fagua","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/G2BC%2Fagua/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/G2BC%2Fagua/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/G2BC%2Fagua/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/G2BC","download_url":"https://codeload.github.com/G2BC/agua/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":247361598,"owners_count":20926642,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":[],"created_at":"2024-12-18T22:17:12.694Z","updated_at":"2025-04-05T15:42:36.845Z","avatar_url":"https://github.com/G2BC.png","language":"Jupyter Notebook","funding_links":[],"categories":[],"sub_categories":[],"readme":"# Trabalho de Conclusão de Curso - Implementações\r\n\r\n## Table of Contents\r\n\r\n- [About](#about)\r\n- [Getting Started](#getting_started)\r\n- [Usage](#usage)\r\n\u003c!-- - [Contributing](../CONTRIBUTING.md) --\u003e\r\n\r\n## About \u003ca name = \"about\"\u003e\u003c/a\u003e\r\n\r\nEstá branch versionará todas as implementações realizadas no desenvolvimento do TCC.\r\n\r\n## Getting Started \u003ca name = \"getting_started\"\u003e\u003c/a\u003e\r\n\r\nThese instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See [deployment](#deployment) for notes on how to deploy the project on a live system.\r\n\r\n### Prerequisites\r\n\r\nÉ necessário ter os seguintes programas instalados:\r\n\r\n```programs\r\npython3\r\nncbi-blast+\r\nClustal Omega\r\nScipy\r\nvirtualenv (Opcional)\r\n```\r\n\r\n#### Gerando arquivo requirements.txt (Caso necessário atualizar o já existente)\r\n\r\n```\r\npip freeze \u003e requirements.txt\r\n```\r\n\r\n### Installing\r\n\r\nÉ recomendado que a instalação dos pacotes necessários seja realizada em um ambiente virtual.\r\n\r\nPassos iniciais para criação do ambiente virtual com o virtualenv e instalação das bibs requeridas pelo projeto:\r\nObs.: A criação do ambiente virtual deve ser realizado dentro da pasta do projeto.\r\n\r\n```bash\r\nvirtualenv `nome_do_ambiente`\r\nsource `nome_do_ambiente`/bin/activate\r\npip install -r requirements.txt\r\n```\r\n\r\nInstalação necessárias feitas em um sistema linux(Caso estaja em outro SO, verifique como realizar a instalação no seu caso):\r\n\r\n```bash\r\n- sudo apt install ncbi-blast+\r\n- sudo apt install clustalo\r\n- sudo apt install python3-scipy\r\n```\r\n\r\nApós isso é possível abrir e executar os notebooks disponíveis.\r\n\r\n## Usage \u003ca name = \"usage\"\u003e\u003c/a\u003e\r\n\r\nAdd notes about how to use the system.\r\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fg2bc%2Fagua","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fg2bc%2Fagua","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fg2bc%2Fagua/lists"}