{"id":20380384,"url":"https://github.com/gagniuc/global-sequence-alignment-in-js","last_synced_at":"2025-08-24T10:20:33.132Z","repository":{"id":151549603,"uuid":"452020310","full_name":"Gagniuc/Global-sequence-alignment-in-JS","owner":"Gagniuc","description":"This implementation makes a global alignment between two strings and it demonstrates the use of the global alignment algorithm.","archived":false,"fork":false,"pushed_at":"2022-11-23T00:26:31.000Z","size":40,"stargazers_count":4,"open_issues_count":0,"forks_count":1,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-03-04T22:25:29.788Z","etag":null,"topics":["alignment","bioinformatics","dna","global","proteins","rna","sequence"],"latest_commit_sha":null,"homepage":"","language":"HTML","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/Gagniuc.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":".github/FUNDING.yml","license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null},"funding":{"github":"Gagniuc"}},"created_at":"2022-01-25T19:50:22.000Z","updated_at":"2024-01-17T23:46:15.000Z","dependencies_parsed_at":null,"dependency_job_id":"dcd562ad-6b94-483a-ae8c-45dbe6d149ba","html_url":"https://github.com/Gagniuc/Global-sequence-alignment-in-JS","commit_stats":{"total_commits":29,"total_committers":1,"mean_commits":29.0,"dds":0.0,"last_synced_commit":"eb38473852ab60180a5cf307f6322d4687fd5d1c"},"previous_names":[],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/Gagniuc/Global-sequence-alignment-in-JS","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Gagniuc%2FGlobal-sequence-alignment-in-JS","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Gagniuc%2FGlobal-sequence-alignment-in-JS/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Gagniuc%2FGlobal-sequence-alignment-in-JS/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Gagniuc%2FGlobal-sequence-alignment-in-JS/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Gagniuc","download_url":"https://codeload.github.com/Gagniuc/Global-sequence-alignment-in-JS/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Gagniuc%2FGlobal-sequence-alignment-in-JS/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":271844393,"owners_count":24832755,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-24T02:00:11.135Z","response_time":111,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["alignment","bioinformatics","dna","global","proteins","rna","sequence"],"created_at":"2024-11-15T02:07:06.225Z","updated_at":"2025-08-24T10:20:33.076Z","avatar_url":"https://github.com/Gagniuc.png","language":"HTML","funding_links":["https://github.com/sponsors/Gagniuc"],"categories":[],"sub_categories":[],"readme":"# Global sequence alignment in JS\n\nThis JavaScript/HTML5 implementation makes a \u003cb\u003eglobal sequence alignment\u003c/b\u003e between two strings, namely between a sequence \u003ckbd\u003es0='TGAATTCAGTTA'\u003c/kbd\u003e and \u003ckbd\u003es1='TGGATCGA'\u003c/kbd\u003e. In fact, this simple implementation makes an alignment between any two strings. All symbols from \u003ckbd\u003eUTF-8\u003c/kbd\u003e are accepted by this algorithm. For an implementation of \u003cb\u003elocal sequence alignment\u003c/b\u003e please see [this repository](https://github.com/Gagniuc/Local-sequence-alignment-in-JS).\n\n# Live demo \n\nhttps://gagniuc.github.io/Global-sequence-alignment-in-JS/\n\n# Screenshot\n\n![screenshot](https://github.com/Gagniuc/Global-sequence-alignment-in-JS/blob/main/img/global%20sequence%20alignment.png?raw=true)\n\n# References\n\n- \u003ci\u003ePaul A. Gagniuc. Algorithms in Bioinformatics: Theory and Implementation. John Wiley \u0026 Sons, Hoboken, NJ, USA, 2021, ISBN: 9781119697961.\u003c/i\u003e\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgagniuc%2Fglobal-sequence-alignment-in-js","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fgagniuc%2Fglobal-sequence-alignment-in-js","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgagniuc%2Fglobal-sequence-alignment-in-js/lists"}