{"id":17094815,"url":"https://github.com/garryod/ad_denoise","last_synced_at":"2025-06-13T05:32:04.269Z","repository":{"id":58366196,"uuid":"522890376","full_name":"garryod/ad_denoise","owner":"garryod","description":"CNN based x-ray area detector denoising","archived":false,"fork":false,"pushed_at":"2023-09-18T11:38:17.000Z","size":9830,"stargazers_count":0,"open_issues_count":5,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-03-23T17:17:43.526Z","etag":null,"topics":["image-denoising","python","xray-diffraction"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/garryod.png","metadata":{"files":{"readme":"README.rst","changelog":null,"contributing":".github/CONTRIBUTING.rst","funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2022-08-09T09:48:28.000Z","updated_at":"2022-12-07T11:42:43.000Z","dependencies_parsed_at":"2024-12-01T08:06:21.430Z","dependency_job_id":null,"html_url":"https://github.com/garryod/ad_denoise","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/garryod/ad_denoise","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/garryod%2Fad_denoise","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/garryod%2Fad_denoise/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/garryod%2Fad_denoise/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/garryod%2Fad_denoise/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/garryod","download_url":"https://codeload.github.com/garryod/ad_denoise/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/garryod%2Fad_denoise/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":259588789,"owners_count":22880852,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["image-denoising","python","xray-diffraction"],"created_at":"2024-10-14T14:24:32.082Z","updated_at":"2025-06-13T05:32:04.228Z","avatar_url":"https://github.com/garryod.png","language":"Python","funding_links":[],"categories":[],"sub_categories":[],"readme":"ad_denoise\n==========\n\n|code_ci| |docs_ci| |coverage| |license|\n\nThis package provides the tools necessary to train a neural network to denoise\nsynchrotron x-ray area detector images.\n\n============== ==============================================\nSource code    https://github.com/garryod/ad_denoise\nDocumentation  https://garryod.github.io/ad_denoise\nReleases       https://github.com/garryod/ad_denoise/releases\n============== ==============================================\n\nModel training can be performed using the command below:\n\n.. code:: bash\n\n    python -m ad_denoise train my_config.yaml\n\nWhere ``my_config.yaml`` is as so:\n\n.. code:: yaml\n\n    max_epochs: 50\n    model:\n        Noise2Self:\n            network:\n                Gaussian:\n                    kernel_half_width: 3\n                    train_dataset:\n                        Hdf5ADImagesDataset:\n                            data_paths:\n                            - /dls/i22/data/2022/cm31149-3/Denoising/i22-629817.nxs\n                            frame_key: entry1/detector/data\n                            count_times_key: entry1/instrument/detector/count_time\n                            mask_path: /dls/i22/data/2022/cm31149-3/processing/SAXS_mask.nxs\n                            mask_key: entry/mask/mask\n                    val_dataset:\n                        InputTargetDataset:\n                            input:\n                                Hdf5ADImagesDataset:\n                                    data_paths:\n                                    - /dls/i22/data/2022/cm31149-3/Denoising/i22-629817.nxs\n                                    frame_key: entry1/detector/data\n                                    count_times_key: entry1/instrument/detector/count_time\n                                    mask_path: /dls/i22/data/2022/cm31149-3/processing/SAXS_mask.nxs\n                                    mask_key: entry/mask/mask\n                            target:\n                                Hdf5ADImagesDataset:\n                                    data_paths:\n                                    - /dls/i22/data/2022/cm31149-3/Denoising/i22-629822.nxs\n                                    - /dls/i22/data/2022/cm31149-3/Denoising/i22-629823.nxs\n                                    frame_key: entry1/detector/data\n                                    count_times_key: entry1/instrument/detector/count_time\n                                    mask_path: /dls/i22/data/2022/cm31149-3/processing/SAXS_mask.nxs\n                                    mask_key: entry/mask/mask\n\n.. |code_ci| image:: https://github.com/garryod/ad_denoise/workflows/Code%20CI/badge.svg?branch=main\n    :target: https://github.com/garryod/ad_denoise/actions?query=workflow%3A%22Code+CI%22\n    :alt: Code CI\n\n.. |docs_ci| image:: https://github.com/garryod/ad_denoise/workflows/Docs%20CI/badge.svg?branch=main\n    :target: https://github.com/garryod/ad_denoise/actions?query=workflow%3A%22Docs+CI%22\n    :alt: Docs CI\n\n.. |coverage| image:: https://codecov.io/gh/garryod/ad_denoise/branch/main/graph/badge.svg\n    :target: https://codecov.io/gh/garryod/ad_denoise\n    :alt: Test Coverage\n\n.. |license| image:: https://img.shields.io/badge/License-Apache%202.0-blue.svg\n    :target: https://opensource.org/licenses/Apache-2.0\n    :alt: Apache License\n\n..\n    Anything below this line is used when viewing README.rst and will be replaced\n    when included in index.rst\n\nSee https://garryod.github.io/ad_denoise for more detailed documentation.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgarryod%2Fad_denoise","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fgarryod%2Fad_denoise","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgarryod%2Fad_denoise/lists"}