{"id":39464203,"url":"https://github.com/gear-genomics/tracy","last_synced_at":"2026-02-25T16:09:18.576Z","repository":{"id":33064875,"uuid":"137339828","full_name":"gear-genomics/tracy","owner":"gear-genomics","description":"Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files","archived":false,"fork":false,"pushed_at":"2026-02-25T15:11:18.000Z","size":2407,"stargazers_count":121,"open_issues_count":8,"forks_count":24,"subscribers_count":5,"default_branch":"main","last_synced_at":"2026-02-25T15:40:51.185Z","etag":null,"topics":["alignment","chromatogram","crispr-analysis","crispr-cas9","genetic-engineering","indel","indel-discovery","pcr","pcr-products","sanger-chromatograms","sanger-sequencing","sanger-trace-alignment","sequencing","tracy","variant-calling"],"latest_commit_sha":null,"homepage":"https://www.gear-genomics.com/","language":"C++","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/gear-genomics.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":"AUTHORS","dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2018-06-14T09:54:24.000Z","updated_at":"2026-02-25T15:15:29.000Z","dependencies_parsed_at":"2023-01-14T23:14:34.901Z","dependency_job_id":"9b5c99ed-c956-40d4-8538-98185dad32ab","html_url":"https://github.com/gear-genomics/tracy","commit_stats":null,"previous_names":[],"tags_count":24,"template":false,"template_full_name":null,"purl":"pkg:github/gear-genomics/tracy","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gear-genomics%2Ftracy","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gear-genomics%2Ftracy/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gear-genomics%2Ftracy/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gear-genomics%2Ftracy/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/gear-genomics","download_url":"https://codeload.github.com/gear-genomics/tracy/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gear-genomics%2Ftracy/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":29829430,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-02-25T15:41:19.027Z","status":"ssl_error","status_checked_at":"2026-02-25T15:40:47.150Z","response_time":61,"last_error":"SSL_read: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["alignment","chromatogram","crispr-analysis","crispr-cas9","genetic-engineering","indel","indel-discovery","pcr","pcr-products","sanger-chromatograms","sanger-sequencing","sanger-trace-alignment","sequencing","tracy","variant-calling"],"created_at":"2026-01-18T04:48:37.845Z","updated_at":"2026-02-25T16:09:18.558Z","avatar_url":"https://github.com/gear-genomics.png","language":"C++","funding_links":[],"categories":[],"sub_categories":[],"readme":"[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat-square)](http://bioconda.github.io/recipes/tracy/README.html)\n[![Anaconda-Server Badge](https://anaconda.org/bioconda/tracy/badges/downloads.svg)](https://anaconda.org/bioconda/tracy)\n[![C/C++ CI](https://github.com/gear-genomics/tracy/workflows/C/C++%20CI/badge.svg)](https://github.com/gear-genomics/tracy/actions)\n[![Docker CI](https://github.com/gear-genomics/tracy/workflows/Docker%20CI/badge.svg)](https://hub.docker.com/r/geargenomics/tracy/)\n[![GitHub license](https://img.shields.io/badge/License-BSD%203--Clause-blue.svg)](https://github.com/gear-genomics/tracy/blob/master/LICENSE)\n[![GitHub Releases](https://img.shields.io/github/release/gear-genomics/tracy.svg)](https://github.com/gear-genomics/tracy/releases)\n\n\n## Tracy: basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files\n\nTracy is available as a [Bioconda package](https://anaconda.org/bioconda/tracy), as a pre-compiled statically linked binary from [Tracy's github release page](https://github.com/gear-genomics/tracy/releases), as a singularity container [SIF file](https://github.com/gear-genomics/tracy/releases) or as a [Docker container](https://hub.docker.com/r/geargenomics/tracy/).\n\n[Source Code](https://github.com/gear-genomics/tracy/)\n\n[Web Applications](https://www.gear-genomics.com)\n\n[Documentation](https://www.gear-genomics.com/docs/tracy/)\n\n## Citation\n\nRausch, T., Fritz, M.H., Untergasser, A. and Benes, V.         \nTracy: basecalling, alignment, assembly and deconvolution of sanger chromatogram trace files.             \nBMC Genomics 21, 230 (2020).             \n[https://doi.org/10.1186/s12864-020-6635-8](https://doi.org/10.1186/s12864-020-6635-8)\n\n\n## License\n\nTracy is distributed under the BSD 3-Clause license. Consult the accompanying [LICENSE](https://github.com/gear-genomics/tracy/blob/master/LICENSE) file for more details.\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgear-genomics%2Ftracy","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fgear-genomics%2Ftracy","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgear-genomics%2Ftracy/lists"}