{"id":26472673,"url":"https://github.com/getwilds/rcromwell","last_synced_at":"2025-03-19T21:44:15.769Z","repository":{"id":64281916,"uuid":"233677518","full_name":"getwilds/rcromwell","owner":"getwilds","description":"R client for interacting with Cromwell with WDL workflows","archived":false,"fork":false,"pushed_at":"2024-09-17T04:53:04.000Z","size":5136,"stargazers_count":4,"open_issues_count":9,"forks_count":2,"subscribers_count":4,"default_branch":"main","last_synced_at":"2024-09-17T07:38:26.815Z","etag":null,"topics":["r","r-package","rstats","wilds-r","workflow","workflow-engine","workflow-management"],"latest_commit_sha":null,"homepage":"http://getwilds.org/rcromwell/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/getwilds.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS.md","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":".github/CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2020-01-13T19:37:06.000Z","updated_at":"2024-09-17T05:42:25.000Z","dependencies_parsed_at":"2024-01-08T18:49:10.635Z","dependency_job_id":"a89a19d4-15cf-4e4f-aa2e-5328af938137","html_url":"https://github.com/getwilds/rcromwell","commit_stats":null,"previous_names":["getwilds/fh.wdlr","getwilds/rcromwell"],"tags_count":29,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/getwilds%2Frcromwell","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/getwilds%2Frcromwell/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/getwilds%2Frcromwell/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/getwilds%2Frcromwell/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/getwilds","download_url":"https://codeload.github.com/getwilds/rcromwell/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":244513554,"owners_count":20464597,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"keywords":["r","r-package","rstats","wilds-r","workflow","workflow-engine","workflow-management"],"created_at":"2025-03-19T21:44:15.282Z","updated_at":"2025-03-19T21:44:15.762Z","avatar_url":"https://github.com/getwilds.png","language":"R","funding_links":[],"categories":[],"sub_categories":[],"readme":"\u003c!-- README.md is generated from README.Rmd. Please edit that file --\u003e\n\n```{r include=FALSE}\nknitr::opts_chunk$set(\n  comment = \"#\u003e\",\n  collapse = TRUE,\n  warning = FALSE,\n  fig.path = \"man/figures/README-\",\n  out.width = \"100%\"\n)\n```\n\n# rcromwell\n\n\u003c!-- badges: start --\u003e\n[![Project Status: Experimental – Useable, some support, not open to feedback, unstable API.](https://getwilds.github.io/badges/badges/experimental.svg)](https://getwilds.github.io/badges/#experimental)\n[![R-CMD-check](https://github.com/getwilds/rcromwell/actions/workflows/R-CMD-check.yaml/badge.svg?branch=dev)](https://github.com/getwilds/rcromwell/actions/workflows/R-CMD-check.yaml)\n[![codecov](https://codecov.io/gh/getwilds/rcromwell/graph/badge.svg?token=AVQ6J31XZ3)](https://codecov.io/gh/getwilds/rcromwell)\n\u003c!-- badges: end --\u003e\n\nConvenience Tools for Managing WDL Workflows via Cromwell\n\nCromwell is a scientific workflow engine designed for simplicity and scalability. It's maintained by the [Broad Institute](https://www.broadinstitute.org/). ([docs](https://cromwell.readthedocs.io/en/latest/), [code source](https://github.com/broadinstitute/cromwell)).\n\n`rcromwell` is maintained by the [Fred Hutch Cancer Center Data Science Lab](https://hutchdatascience.org/).\n\n## Installation\n\nYou can install the development version of `rcromwell` from [GitHub](https://github.com/) with:\n\n```r\n# install.packages(\"pak\")\npak::pak(\"getwilds/rcromwell\")\n```\n\n## Documentation\n\nGo to \u003chttp://getwilds.org/rcromwell/\u003e for `rcromwell` package documentation. Go to the [Get Started vignette](https://getwilds.org/rcromwell/articles/rcromwell.html) to get started, or [reference page](https://getwilds.org/rcromwell/reference/index.html) for the function documentation.\n\n## Bugs? Features?\n\nOpen an issue on our [issue tracker](https://github.com/getwilds/rcromwell/issues/).\n\n## Code of Conduct\n\nPlease note that the rcromwell project is released with a [Contributor Code of Conduct](http://getwilds.org/rcromwell/CODE_OF_CONDUCT.html). By contributing to this project, you agree to abide by its terms.\n\n## License\n\n[MIT](LICENSE.md)\n\n## Prior art\n\n- [wdlRunR](https://github.com/seandavi/wdlRunR) - archived package/repo\n","project_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgetwilds%2Frcromwell","html_url":"https://awesome.ecosyste.ms/projects/github.com%2Fgetwilds%2Frcromwell","lists_url":"https://awesome.ecosyste.ms/api/v1/projects/github.com%2Fgetwilds%2Frcromwell/lists"}